 |
Job Description | P0ADW3 | Confidence | 13.49% | Date | Thu Jan 5 11:21:58 GMT 2012 |
Rank | 58 | Aligned Residues | 49 |
% Identity | 16% | Template | c2npsB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:syntaxin 13; |
PDBTitle: crystal structure of the early endosomal snare complex
|
Resolution | 2.50 Å |
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | E | L | E | K | N | K | A | E | L | D | E | Y | R | E | E | L | V | S | H | F | A | R | S | A | E | L | L | D | T | M | A | H | D | Y | R | Q | L | Y | Q | H | M | A | K | S | S | S | S | L |
Query Conservation |   |
  |
|
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
Q | Q | L | E | A | D | I | L | D | V | N | Q | I | F | K | D | L | A | M | M | I | H | D | Q | G | D | L | I | D | S | I | E | A | N | V | E | S | S | E | V | H | V | E | R | A | S | D | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|