Job Description P32143 Confidence 100.00% Date Thu Jan 5 11:49:29 GMT 2012 Rank 39 Aligned Residues 291 % Identity 16% Template d2ajra1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.46

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure							.														.	.
Query SS confidence							.														.	.
Query Sequence		V	A	C	V	G	.	I	T	V	M	D	R	I	Y	Y	V	E	G	L	.	.	P	T	E	S	G	K	Y	V	A	R	N	Y	T	E	V	G	G	G	P	A	A	T	A	A	V	A	A	A	R	L	G	A	Q	V	D	F	I	G	R	V	G	D	D	D	T	G	N	S	L	L	A	E	L	E	S	W	G	V	N
Query Conservation							.														.	.
Alig confidence							.														.	.																																												.
Template Conservation																																																																		.
Template Sequence		V	L	T	V	T	L	N	P	A	L	D	R	E	I	F	I	E	D	F	Q	V	N	R	L	Y	R	I	N	D	L	S	K	T	Q	X	S	P	G	G	K	G	I	N	V	S	I	A	L	S	K	L	G	V	P	S	V	A	T	G	F	V	G	G	Y	.	X	G	K	I	L	V	E	E	L	R	K	I	S	K	L
Template Known Secondary structure							S	S										T	T			S	S							S	G	G	G							S												T	T													.														T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																.	.	.	.	.															.	.	.	.	.
Query SS confidence																																																.	.	.	.	.															.	.	.	.	.
Query Sequence		T	R	Y	T	K	R	Y	N	Q	A	K	S	S	Q	S	A	I	M	V	D	T	K	G	E	R	I	I	I	N	Y	P	S	P	D	L	L	P	D	A	E	W	L	E	E	I	D	.	.	.	.	.	F	S	Q	W	D	V	V	L	A	D	V	R	W	H	.	.	.	.	.	D	G	A	K	K	A	F	T	L	A
Query Conservation																																																.	.	.	.	.															.	.	.	.	.
Alig confidence																																																.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	N	F	V	Y	V	E	G	E	T	R	E	N	I	E	I	I	D	E	K	N	K	T	I	T	A	I	N	F	P	G	P	D	V	T	D	X	D	V	N	H	F	L	R	R	Y	K	X	T	L	S	K	V	D	C	V	V	I	S	G	S	I	P	P	G	V	N	E	G	I	C	N	E	L	V	R	L	A
Template Known Secondary structure										S	S											T	T	T	T																													T	T		S						S				T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		151	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure												.																																		.	.	.	.	.	.
Query SS confidence												.																																		.	.	.	.	.	.
Query Sequence		R	Q	A	G	V	M	T	V	L	D	.	G	D	I	T	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	K	E	.	.	.	.	.	.	M	A	S	A	L	K	Q	A	Q	T	L	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D	W	L	E	N
Query Conservation												.																																		.	.	.	.	.	.
Alig confidence												.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	R	G	V	F	V	F	V	E	Q	T	P	R	L	L	E	R	I	Y	E	G	P	E	F	P	N	V	V	K	P	D	L	R	G	N	H	A	S	F	L	G	V	D	L	K	T	F	D	D	Y	V	K	L	A	E	K	L	A	E	K	S	Q	V	S	V	V	S	Y	E	V	K	N	D	I	V	A	T	R	E
Template Known Secondary structure				T	T																		S	S				S							T	T			S		B	T	T	B				S															S	S							T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		G	G	R	Q	H	Q	P	A	F	K	V	D	V	V	D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	.	T	S	G	D	L	A	E	S	V	R	F	A	S	G	V	A	A	L	K	C	T	R	P	G	G	R	A	G	I	P	D	C	D	Q	T	R	S	F	L	S	L	F
Query Conservation																																		.
Alig confidence																																		.																												.	.
Template Conservation																																																														.	.
Template Sequence		G	V	W	L	I	R	S	K	E	E	I	D	T	S	H	L	L	G	A	G	D	A	Y	V	A	G	X	V	Y	Y	F	I	K	H	G	A	N	F	L	E	X	A	K	F	G	F	A	S	A	L	A	A	T	R	R	K	E	K	Y	X	.	.	P	D	L	E	A	I	K	K	E	Y	D	H	F
Template Known Secondary structure									S	S				G	G	G		T	T																		S																	T	T	S	S	S				.	.								T	T	G	G	G
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions