Job Description P32143 Confidence 99.24% Date Thu Jan 5 11:49:29 GMT 2012 Rank 51 Aligned Residues 149 % Identity 17% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.
Predicted Secondary structure																											.	.	.								.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																											.	.	.								.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		Q	W	D	V	V	L	A	D	V	R	W	H	D	G	A	K	K	A	F	T	L	A	R	Q	A	.	.	.	G	V	M	T	V	L	D	.	.	.	.	.	G	D	I	T	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	K	.	.	.	.	.	.	.	E
Query Conservation																											.	.	.								.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence																											.	.	.								.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	C	N	V	I	K	T	G	M	L	T	A	A	A	I	E	V	L	H	E	K	L	L	Q	L	G	E	N	R	P	K	L	V	V	D	P	V	L	V	A	K	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C	Y	K	L	L	G	E	E	R	K	V	N	G	L	Q	D
Template Known Secondary structure				S						S																	G	G	G																							T	G	G	G		S					B								T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		194	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure													.																						.	.
Query SS confidence													.																						.	.
Query Sequence		M	A	S	A	L	K	Q	A	Q	T	L	.	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D	W	L	E	N	G	G	.	.	R	Q	H	Q	P	A	F	K	V	D	V	V	D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	T	S	G	D	L	A	E	S	V	R	F	A	S	G	V
Query Conservation													.																						.	.
Alig confidence													.																						.	.
Template Conservation
Template Sequence		I	F	Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L	V	K	G	G	H	I	T	D	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A	R	G	Y	S	L	P	Q	S	V	Y	G	G	I	E	Y
Template Known Secondary structure																S																T	T	T	T													S			B	T																T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	K	C	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	N	A	V	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions