Job Description P32143 Confidence 100.00% Date Thu Jan 5 11:49:29 GMT 2012 Rank 30 Aligned Residues 282 % Identity 17% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	A	C	V	G	I	T	V	M	D	R	I	Y	Y	V	E	G	L	P	T	E	S	G	K	Y	V	A	R	N	Y	T	E	V	G	G	G	P	A	A	T	A	A	V	A	A	A	R	L	G	A	Q	.	V	D	F	I	G	R	V	G	D	D	D	T	G	N	S	L	L	A	E	L	E	S	W	G	V	N	T	R
Query Conservation																																																					.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																									.											.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		L	L	V	I	G	S	L	A	F	D	D	I	E	T	P	F	.	.	.	.	.	.	.	.	.	.	.	G	R	S	D	N	T	L	G	G	S	S	T	Y	I	A	L	S	A	S	Y	F	T	D	E	P	I	R	X	V	G	V	V	G	S	D	.	F	G	K	E	H	F	D	L	L	H	A	K	N	I	D	T	R
Template Known Secondary structure						S										S	S	.	.	.	.	.	.	.	.	.	.	.																			T	T	T		S	S										T	T	.	S											T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.												.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	K	R	Y	N	Q	A	K	S	S	Q	S	A	I	M	V	D	T	K	G	E	R	I	I	I	N	Y	P	S	P	D	L	L	P	D	A	E	W	L	E	E	I	D	F	S	Q	W	D	V	V	L	A	D	V	R	W	H	D	G	A	K	K	A	F	T	L	A	R	Q	A	G	V	M	T	V	L	D	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	Q	V	I	E	D	G	K	T	F	R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	T	Q	L	N	V	F	A	E	F	D	P	H	V	P	Q	Y	Y	R	D	S	K	F	V	C	L	G	N	I	D	P	E	L	Q	L	K	V	L	D	Q	I	D	D	P	K	L	V	V	C	D	T	X	N
Template Known Secondary structure							T	T												T	T	S	S										G	G	G	T	T							G	G	G	T	T		S						S	S										T	T		S	S		S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
						163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.
Predicted Secondary structure		.	.	.	.																																																																										.
Query SS confidence		.	.	.	.																																																																										.
Query Sequence		.	.	.	.	I	T	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	K	E	M	A	S	A	L	K	Q	A	Q	T	L	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D	W	L	E	N	G	G	R	Q	H	Q	P	A	F	K	V	D	.	V	V
Query Conservation		.	.	.	.																																																																										.
Alig confidence		.	.	.	.																																																																										.
Template Conservation
Template Sequence		F	W	I	E	G	K	P	E	E	L	K	K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	G	D	P	N	L	V	K	T	A	R	I	I	R	E	X	G	P	K	T	L	I	I	K	K	G	E	H	G	A	L	L	F	T	D	N	G	I	F	A	A	P	A	F	P	L	E	S	I	Y
Template Known Secondary structure																T	T		S														S		S											T	T	S		S							T	T	S							T	T									T	T				S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																										.
Query SS confidence																									.	.	.	.	.																										.
Query Sequence		D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	T	S	G	D	L	.	.	.	.	.	A	E	S	V	R	F	A	S	G	V	A	A	L	K	C	T	R	P	G	G	R	A	G	I	P	.	D	C	D	Q	T	R	S	F	L	S	L	F
Query Conservation																									.	.	.	.	.																										.
Alig confidence																									.	.	.	.	.																										.
Template Conservation
Template Sequence		D	P	T	G	A	G	D	T	F	A	G	G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A	X	A	S	F	C	V	E	Q	F	G	P	Y	R	Y	N	D	L	D	L	L	E	V	D	D	R	Y	Q	S	F
Template Known Secondary structure				T	T																				S																			T	T	S	S	T	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions