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Job DescriptionP32143
Confidence97.94%DateThu Jan 5 11:49:29 GMT 2012
Rank60Aligned Residues147
% Identity14%Templatec3k5wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of a carbohydrate kinase (yjef family)from2 helicobacter pylori
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190 .........200.........210.......
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Query Sequence  FTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTG. . . . . . . . . VKEMASALKQAQTLTNGHVYVTQGSAG
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Template Sequence  FNRWLELAPCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISXLELLDNKLARDFSQKYPKVVLLLKG. AN
Template Known Secondary structure  S
GGGGGSGGGGTTTTSS

TS



TTSGGGS



TT
S.SS
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   308.310.........320.........330.........340.........350.........360.........370.........380.... ..
 
   218.220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  CDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSL
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Template Sequence  TLIAHQGQVFINILGSVA. LAKAGSGDVLAGLILSLLSQNYTPLDAAINASLAHALASLEFKNNYAL. TPLDLIEKIKQ
Template Known Secondary structure  TT



GG.G
STTTT

GGGG
SSTT

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T
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   389390.........400...... ...410.........420.........430.........440.........450.... .....460.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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