Job Description P32143 Confidence 100.00% Date Thu Jan 5 11:49:29 GMT 2012 Rank 37 Aligned Residues 273 % Identity 18% Template c3bf5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribokinase related protein; PDBTitle: crystal structure of putative ribokinase (10640157) from thermoplasma2 acidophilum at 1.91 a resolution Resolution 1.91 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	V	A	C	V	G	I	T	V	M	D	R	I	Y	Y	V	E	G	L	P	T	E	S	G	K	Y	V	A	R	N	Y	T	E	V	G	G	G	P	A	A	T	A	A	V	A	A	A	R	L	G	A	Q	V	D	F	I	G	R	V	G	D	D	D	T	G	N	S	L	L	A	E	L	E	S	W	G	V	N	T
Query Conservation
Alig confidence																											.																																												.
Template Conservation																											.																																												.
Template Sequence		R	F	L	A	Y	F	G	H	L	N	I	D	V	L	I	S	V	D	S	I	P	R	E	G	S	.	V	N	V	K	D	L	R	P	R	F	G	G	T	A	G	N	F	A	I	V	A	Q	K	F	R	I	P	F	D	L	Y	S	A	V	G	X	K	T	H	R	E	Y	L	.	A	X	I	E	S	X	G	I	N	T
Template Known Secondary structure																			S				S	S	S		.				S																				T	T											T	T	T						.						T	T
Template Predicted Secondary structure																											.																																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	T	K	R	Y	N	Q	A	K	S	S	Q	S	A	I	M	V	D	T	K	G	E	R	I	I	I	N	Y	P	S	P	D	L	L	P	D	A	E	W	L	E	E	I	D	F	S	Q	W	D	V	V	L	A	D	V	R	W	H	D	G	A	K	K	A	F	T	L	A	R	Q	A	G	V	M	T	V	L	D	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		G	H	V	E	K	F	E	D	E	S	G	P	I	C	Y	I	A	T	D	G	K	K	Q	V	S	F	X	H	Q	G	A	.	.	.	.	.	.	X	A	A	W	A	P	Q	L	A	D	E	Y	E	Y	V	H	F	S	T	G	P	N	.	.	.	.	.	Y	L	D	X	A	K	S	I	R	S	K	I	I	F	D	P
Template Known Secondary structure		T	T					T	T				S								S	S									T		.	.	.	.	.	.										S									S	S	S	S	.	.	.	.	.										S
Template Predicted Secondary structure																																	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		162	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		D	I	T	.	.	.	.	.	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	K	E	M	A	S	A	L	K	Q	A	Q	T	L	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D	W	L	E	N	G	G	R	Q	H	Q	P	A	F	K	V	D	V
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																															.	.	.	.	.	.	.	.																																		.
Template Conservation																																								.	.	.	.	.	.	.	.																																		.
Template Sequence		S	Q	E	I	H	K	Y	S	K	D	E	L	K	K	F	H	E	I	S	Y	X	S	I	F	N	D	H	E	Y	R	V	F	R	E	X	T	G	L	.	.	.	.	.	.	.	.	S	S	P	K	V	T	T	I	V	T	N	G	E	R	G	S	S	L	F	X	D	G	K	K	Y	D	F	P	A	I	P	S	S	.
Template Known Secondary structure		G	G	G	G	G	G	S													S																			.	.	.	.	.	.	.	.	S	S		S	S							G	G	G							T	T												.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																																		.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	T	S	G	D	L	A	E	S	V	R	F	A	S	G	V	A	A	L	K	C	T	R	P	G	G	R	A	G	I	P	D	C	D	Q	T	R	S	F	L	S	L	F
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		G	D	T	V	G	A	G	D	S	F	R	A	G	L	Y	L	A	L	Y	N	R	R	S	I	E	K	G	X	I	Y	G	T	I	I	A	H	H	V	I	.	D	D	G	I	E	N	F	S	L	N	X	E	D	L	E	R	E	T	E	N	Y
Template Known Secondary structure		S			T	T															T	T																			.				S	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions