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Job DescriptionP32143
Confidence100.00%DateThu Jan 5 11:49:29 GMT 2012
Rank1Aligned Residues297
% Identity35%Templatec2rbcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sugar kinase; PDBTitle: crystal structure of a putative ribokinase from agrobacterium2 tumefaciens
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNT
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Template Sequence  KHVLCVGAAVLDTLFRVADXPKGEGKVLPYEVLQIAEGXASSAAYAVHRXGGRASLWGAVGDDETGTRILRDLSESGIDT
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDG
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Template Sequence  SGXTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDG
Template Known Secondary structure  TT
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TTS


GGGGSS




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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   162.. .....170.........180.........190.........200...... ...210.........220..... ....230.......
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Query Sequence  DIT. PQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTN. GHVYVTQGSAGCDWLENGG. . RQHQPAFKVDVV
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Template Sequence  DVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDXLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTXQVEAV
Template Known Secondary structure 
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GGG
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GGG

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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   238.240.........250.........260.........270.........280.........290........
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Query Sequence  DTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
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Template Sequence  DTLAAGDIFHGTFALAXAEGXQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAXRQWL
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TTTT

TSSSGGGG


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   248.250.........260.........270.........280.........290.........300........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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