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Job DescriptionP32143
Confidence100.00%DateThu Jan 5 11:49:29 GMT 2012
Rank41Aligned Residues272
% Identity17%Templatec2qhpA_
PDB info PDB header:transferaseChain: A: PDB Molecule:fructokinase; PDBTitle: crystal structure of fructokinase (np_810670.1) from bacteroides2 thetaiotaomicron vpi-5482 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  RVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTR
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Template Sequence  IIVGXGEALWDVL. . . . . . . . . . . . . . . . PEGKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIXEVFKEKQLKNQ
Template Known Secondary structure  S

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   4.....10...... ...20.........30.........40.........50.........60.......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  YTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGD
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Template Sequence  IERVDYPTGTVQ. VTPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTXPDIDGQLKIFDI
Template Known Secondary structure  SS

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SS
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SGGGSSS

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   68.70......... 80.........90.........100.........110.........120.........130.........140......
 
   163. .....170.........180.........190 .........200.........210.........220.........230
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Query Sequence  IT. . . . . . PQDISELVALSDHAAFSEPGLARLTG. . . . . . VKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQP
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Template Sequence  NLRQDFYTKEVLRESFKRCNILKINDEELVTISRXFGYPGIDLQDKCWILLAKYNLKXLILTCGINGSYVFTPGVVSFQE
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TT



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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   231........240.........250.........260.........270.........280.........290.
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Query Sequence  AFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTR
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Template Sequence  TPKVPVADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAXPELPVILKDR
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S

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   233......240.........250.........260.........270.........280.........290...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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