Job Description P32143 Confidence 100.00% Date Thu Jan 5 11:49:29 GMT 2012 Rank 19 Aligned Residues 287 % Identity 19% Template c2qcvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative 5-dehydro-2-deoxygluconokinase; PDBTitle: crystal structure of a putative 5-dehydro-2-deoxygluconokinase (iolc)2 from bacillus halodurans c-125 at 1.90 a resolution Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	V	A	C	V	G	I	T	V	M	D	R	I	Y	Y	V	E	G	L	P	T	E	S	G	K	Y	V	A	R	N	Y	T	E	V	G	G	G	P	A	A	T	A	A	V	A	A	A	R	L	G	A	Q	V	D	F	I	G	R	V	G	D	D	D	T	G	N	S	L	L	A	E	L	E	S	W	G	V	N	T
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		F	D	L	I	A	I	G	R	A	C	I	D	L	N	A	V	E	Y	N	R	P	X	E	E	.	.	.	.	T	X	T	F	S	K	Y	V	G	G	S	P	A	N	I	V	I	G	S	S	K	L	G	L	K	A	G	F	I	G	K	I	A	D	D	Q	H	G	R	F	I	E	S	Y	X	R	G	V	G	V	D	T
Template Known Secondary structure								S									S	S		S	S		G	G	G	.	.	.	.										S												T	T											S	S													T	T		B
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure											.																										.	.																							.	.	.	.	.	.
Query SS confidence											.																										.	.																							.	.	.	.	.	.
Query Sequence		R	Y	T	K	R	Y	N	Q	A	.	K	S	S	Q	S	A	I	M	V	D	T	K	G	E	R	I	I	I	N	Y	P	S	P	D	L	.	.	L	P	D	A	E	W	L	E	E	I	D	F	S	Q	W	D	V	V	L	A	D	V	.	.	.	.	.	.	R	W	H	D	G	A	K	K	A	F	T	L	A	R	Q
Query Conservation											.																										.	.																							.	.	.	.	.	.
Alig confidence											.																										.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	V	V	D	Q	E	G	H	K	T	G	L	A	F	T	E	I	K	S	P	E	E	C	S	I	L	X	Y	R	Q	D	V	A	D	L	Y	L	S	P	E	E	V	N	E	A	Y	I	R	R	S	K	L	L	L	V	S	G	T	A	L	S	K	S	P	S	R	E	A	V	L	K	A	I	R	L	A	K	R
Template Known Secondary structure		T	T					S	S														T	T									T	T		G	G	G	G			G	G	G							T	T								G	G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		A	G	V	M	T	V	L	D	G	.	.	.	.	.	.	.	.	.	.	D	I	T	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	.	.	.	K	E	M	A	S	A	L	K	Q	A	Q	T	L	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D
Query Conservation											.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		N	D	V	K	V	V	F	E	L	D	Y	R	P	Y	S	W	E	T	P	E	E	T	A	V	Y	Y	S	L	V	A	E	Q	S	D	I	V	I	G	T	R	E	E	F	D	V	L	E	N	R	T	E	K	G	D	N	D	E	T	I	R	Y	L	F	K	H	S	P	E	L	I	V	I	K	H	G	V	E	G	S	F
Template Known Secondary structure		T	T											G	G	G	S	S																	S													T	T		S	S												T	T	S	S		S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		W	L	E	N	.	G	G	R	Q	H	Q	P	A	F	K	V	D	V	V	D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	T	S	G	D	L	A	E	S	V	R	F	A	S	G	V	A	A	L	K	C	T	R	P	G	G	R	A	G	I	P	D	C	D	Q	T	R	S	F	L	S	L	F
Query Conservation						.
Alig confidence						.																																																									.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		A	Y	T	K	A	G	E	A	Y	R	G	Y	A	Y	K	T	K	V	L	K	T	F	G	A	G	D	S	Y	A	S	A	F	L	Y	A	L	I	S	G	K	G	I	E	T	A	L	K	Y	G	S	A	S	A	S	I	V	V	S	K	A	X	.	.	.	.	.	P	S	V	E	E	I	E	A	L	I	E	K	D
Template Known Secondary structure					T	T	S								B					S			T	T															T	T																							.	.	.	.	.													T
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions