Job Description P32143 Confidence 99.83% Date Thu Jan 5 11:49:29 GMT 2012 Rank 44 Aligned Residues 210 % Identity 20% Template c2ddmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyridoxine kinase; PDBTitle: crystal structure of pyridoxal kinase from the escherichia2 coli pdxk gene at 2.1 a resolution Resolution 2.10 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.													.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	E	S	G	K	Y	V	A	R	N	Y	T	E	V	G	G	G	P	A	A	T	A	A	V	.	A	A	A	R	L	G	A	Q	V	D	F	I	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	G	D	D	D	T	G	N	S	L	L	A	E	L	E	S	W	G	V	N	T	R	Y	T	K	R	Y	N
Query Conservation																											.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																						.													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	Q	.	A	D	I	V	A	V	Q	S	Q	V	V	Y	G	S	V	G	N	S	I	A	V	P	A	I	K	Q	N	G	L	N	V	F	A	V	P	T	V	L	L	S	N	T	P	H	Y	D	T	F	Y	G	G	A	I	P	D	E	W	F	S	G	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			.		S									S	S	S	S	S	T											T	T												S	S		T	T	S	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	K	S	S	Q	S	A	I	M	V	D	T	K	G	E	R	I	I	I	N	Y	P	S	P	D	L	L	P	D	A	E	W	L	E	E	I	D	F	S	Q	W	D	V	V	L	A	D	V	R	W	H	D	G	A	K	K	A	F	T	L	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	Q	E	R	D	A	L	R	Q	L	R	A	V	T	T	G	Y	M	G	T	A	S	Q	I	K	I	L	A	E	W	L	T	A	L	R	K	D	H	P	D	L	L	I	M	V	D	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T			T	T										S																	T	T		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.																																									.	.	.	.	.
Query SS confidence		.	.	.																																									.	.	.	.	.
Query Sequence		.	.	.	A	G	V	M	T	V	L	D	G	D	I	T	P	Q	D	I	S	E	L	V	A	L	S	D	H	A	A	F	S	E	P	G	L	A	R	L	T	G	V	K	.	.	.	.	.	E	M	A	S	A	L	K	Q	A	Q	T	L	T	N	G	H	V	Y	V	T	Q	G	S	A	G	C	D	W	L	E	N	G
Query Conservation		.	.	.																																									.	.	.	.	.
Alig confidence		.	.	.																																									.	.	.	.	.
Template Conservation
Template Sequence		I	G	D	I	D	S	G	I	Y	V	K	P	D	L	P	E	A	Y	R	Q	Y	L	L	P	L	A	Q	G	I	T	P	N	I	F	E	L	E	I	L	T	G	K	N	C	R	D	L	D	S	A	I	A	A	A	K	S	L	L	S	D	T	L	K	W	V	V	V	T	S	Q	E	M	Q	V	V	V	V	T	A	D
Template Known Secondary structure					T	T	T				S		T	T								T	T	G	G	G		S					B									T	S			S	S														S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Q	H	Q	P	A	F	K	V	D	V	V	D	T	T	G	A	G	D	V	F	H	G	A	L	A	V	A	L	A	T	S	G	D	L	A	E	S	V	R	F	A	S	G	V	A	A	L	K	C	T	R
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		S	V	N	V	I	S	H	S	R	V	.	K	T	D	L	K	G	T	G	D	L	F	C	A	Q	L	I	S	G	L	L	K	G	K	A	L	T	D	A	V	H	R	A	G	L	R	V	L	E	V	M	R	Y
Template Known Secondary structure												.																					T	T
Template Predicted Secondary structure												.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions