Job Description P77656 Confidence 3.56% Date Thu Jan 5 12:31:23 GMT 2012 Rank 42 Aligned Residues 65 % Identity 14% Template c3h25A_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein b; PDBTitle: crystal structure of the catalytic domain of primase repb' in complex2 with initiator dna Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																							.
Query SS confidence																																												.																							.
Query Sequence		N	Y	I	Y	S	A	T	T	N	S	F	Y	P	L	E	M	K	E	D	Y	T	Q	A	G	S	W	P	D	D	A	V	E	V	D	E	Q	V	Y	I	E	F	S	.	G	L	P	P	K	G	K	I	R	I	A	G	E	N	G	F	P	A	W	S	E	I	.	P	P	P	T	H	E	E	Q	I	A	A	A	E	L
Query Conservation																																												.																							.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.											.																							.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	Y	I	R	P	A	E	Q	E	R	H	G	L	V	L	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	E	F	D	L	D	D	M	K	A	E	G	R	E	P	A	L	V	V	E	T	S	P	K	N	Y	Q	A	W	V	K	V	A	D	A	A	G	G	E	L	R	G	Q	I	A	R	T
Template Known Secondary structure									T	T											.	.	.	.	.	.	.	.	.	.	.	.	.												T	T				S							T	T										S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.														.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions