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Job DescriptionP77538
Confidence99.91%DateThu Jan 5 12:30:21 GMT 2012
Rank81Aligned Residues221
% Identity16%Templatec3u1tA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dmma haloalkane dehalogenase; PDBTitle: haloalkane dehalogenase, dmma, of marine microbial origin
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  PDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTP
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Template Sequence  SSEFPFAKRTVEV. EGATIAYVDE. . . . . . . . GSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDSAKPD
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.TT........
SS

TT

GGGGTTTTT


TTSTTS


S
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   44.....50...... ...60...... ...70.........80.........90.........100.........110....
 
   124.....130.........140.........150.........160.........170.........180.....
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Query Sequence  SQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFAS. . . . . . . . . . . . . . . . . .
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Template Sequence  IEYRLQDHVAYXDGFIDALGLDDX. . . . VLVIHDWGSVIGXRHARLNPDRVAAVAFXEALVPPALPXPSYEAXGPQLGPL
Template Known Secondary structure  S


T

S....
TTTS
TTT
SBS
SGGG
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   115....120.........130........ .140.........150.........160.........170.........180.........190
 
   186...190.........200.........210
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YATIANQMIPGSGYLLDESYSGENY
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Template Conservation                                                                                  
Template Sequence  FRDLRTADVGEKXVLDGNFFVETILPEXGVVRSLSEAEXAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGE
Template Known Secondary structure  TSTTTTT
TTS
SS


TT

STGGGS
BTTBS
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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   211........220.........230.........240.........250.........260.........270.........280
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Query Sequence  IASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSAL
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Template Sequence  WLXASPIPKLLFHAEPGALAPKPVVDYLSENVP. NLEVRFVGAGTHFLQED. . HPHLIGQGIADWLRRNK
Template Known Secondary structure 

S

SSS
ST.TSS
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   271........280.........290.........300... ......310.........320 .........330.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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