Job Description P77538 Confidence 99.94% Date Thu Jan 5 12:30:21 GMT 2012 Rank 33 Aligned Residues 218 % Identity 17% Template c3h04A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 staphylococcus aureus subsp. aureus mu50 Resolution 1.90 Å

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		51	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure							.	.																																		.	.	.
Query SS confidence							.	.																																		.	.	.
Query Sequence		S	V	E	F	T	.	.	A	K	D	G	T	R	L	Q	G	W	F	I	P	S	S	T	G	P	A	D	N	A	I	A	T	I	I	H	A	H	G	N	A	.	.	.	G	N	M	S	A	H	W	P	L	V	S	W	L	P	E	R	N	F	N	V	F	M	F	D	Y	R	G	F	G	K	S	K	G	T	P	S	Q
Query Conservation							.	.																																		.	.	.
Alig confidence							.	.																		.	.	.														.	.	.																																	.	.	.	.	.
Template Conservation																										.	.	.																																																	.	.	.	.	.
Template Sequence		E	I	K	Y	K	V	I	T	K	D	A	F	A	L	P	Y	T	I	I	K	A	K	N	Q	.	.	.	P	T	K	G	V	I	V	Y	I	H	G	G	G	L	M	F	G	K	A	N	D	L	S	P	Q	Y	I	D	I	L	T	E	H	Y	D	L	I	Q	L	S	Y	R	L	L	P	E	V	S	.	.	.	.	.
Template Known Secondary structure										T	T	S											S	S	S	.	.	.	S		S									S	T	T	T	S			T	T		S									T	T	T											T	T	T	S		.	.	.	.	.
Template Predicted Secondary structure																										.	.	.																																																	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	L	D	D	T	Q	S	A	I	N	V	V	R	H	R	S	D	V	N	P	Q	R	L	V	L	F	G	Q	S	I	G	G	A	N	I	L	D	V	I	G	R	G	D	R	E	G	I	R	A	V	I	L	D	S	T	F	A	S	Y	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	L	D	C	I	I	E	D	V	Y	A	S	F	D	A	I	Q	S	Q	Y	S	N	C	P	I	F	T	F	G	R	S	S	G	A	Y	L	S	L	L	I	A	R	D	R	D	I	D	G	V	I	D	F	Y	G	Y	S	R	I	N	T	E	P	F	K	T	T	N	S	Y	Y	A	K	I	A	Q	S	I	N	E	T
Template Known Secondary structure		.																		T	T	T	T	S								T													S			S						S			S		S		S					S										T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
																														189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	N	Q	M	I	P	G	S	G	Y	L	L	D	E	S	Y	S	G	E	N	Y	I	A	S	V	S	P	I	P	L	L	L	I	H	G	K	A	D	H	V	I	P	W	Q	H	S	E	K	L	Y	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	A	Q	L	T	S	P	T	P	V	V	Q	D	Q	I	A	Q	R	F	L	I	Y	V	Y	A	R	G	T	G	K	W	I	N	M	I	N	I	A	D	Y	T	D	S	K	Y	N	I	A	P	D	E	L	K	T	L	P	P	V	F	I	A	H	C	N	G	D	Y	D	V	P	V	E	E	S	E	H	I	M	N
Template Known Secondary structure					T	T	S		S	S			S	S		S	S	G	G	G											T									S		T	T	S	G	G	G	S							T	T										T	T		S	S	S		T								T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	A	K	E	P	K	R	L	I	L	I	P	D	G	E	H	I	D	A	F	S	D	R	.	H	G	D	V	Y	R	E	Q	M	V	D	F	I	L	S
Query Conservation																									.
Alig confidence					.																				.
Template Conservation					.
Template Sequence		H	V	P	.	H	S	T	F	E	R	V	N	K	N	E	H	D	F	D	R	R	P	N	D	E	A	I	T	I	Y	R	K	V	V	D	F	L	N	A
Template Known Secondary structure		T		S	.	S								S	S		S		T	T	S	S
Template Predicted Secondary structure					.
Template SS confidence
		234	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions