Job Description P77538 Confidence 98.37% Date Thu Jan 5 12:30:21 GMT 2012 Rank 243 Aligned Residues 119 % Identity 16% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																		.										.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																		.										.	.	.	.	.	.	.	.
Query Sequence		L	Q	G	W	F	I	P	S	S	T	G	P	A	D	N	A	I	A	T	I	I	H	A	H	G	N	A	.	.	.	G	N	M	S	A	H	W	P	L	V	S	W	L	P	E	R	N	.	F	N	V	F	M	F	D	Y	R	.	.	.	.	.	.	.	.	G	F	G	K	S	K	G	T	P	S	Q	A	G	L	L
Query Conservation																													.	.	.																		.										.	.	.	.	.	.	.	.
Alig confidence																													.	.	.								.	.									.										.	.	.	.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		L	Y	L	N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	.	.	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L
Template Known Secondary structure													S			S											S	S	S	S	S			T	T	T	S		.	.									T																	B		S	S	S	S		B
Template Predicted Secondary structure																																							.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		D	D	T	Q	S	A	I	N	V	V	R	H	R	S	D	V	N	P	Q	R	L	V	L	F	G	Q	S	I	G	G	A	N	I	L	D	V	I	G	R	G	D	.	.	R	E	G	I	R	A	V	I	L	D	S	T
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		I	Q	A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G
Template Known Secondary structure												G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions