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Job DescriptionP77538
Confidence100.00%DateThu Jan 5 12:30:21 GMT 2012
Rank2Aligned Residues241
% Identity17%Templatec3azqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of puromycin hydrolase s511a mutant complexed with2 pgg
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70... ......80.........90... ......100.........110
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Query Sequence  PDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGP. . . . ADNAIATIIHAHGNAGNMSA. . HWPLVSWLPERNFNVFM
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Template Sequence  HTDPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVAD
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   379380.........390.........400.........410.........420.........430.........440.........450........
 
   111........120... ......130.........140.........150.........160.........170.........180...
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Query Sequence  FDYRGFGKSKGTP. . . . . . . SQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTF
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Template Sequence  VNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGAAGGWTAASSLV. . STDVYACGTVLYPV
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   459460.........470.........480.........490.........500.........510.........520.. .......530......
 
   184.....190.........200. ........210.........220.........230.........240.. .....
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Query Sequence  ASYATIANQMIPGSGYLL. . . . . . . . . . . . . DESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLA. . . KEPKR
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Template Sequence  LDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHA
Template Known Secondary structure 

TT
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GGGTTTT

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   537..540.........550.........560.........570.........580.........590.........600.........610......
 
   248.250.........260.........270.........280
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Query Sequence  LILIPDGEHIDAFSDRHGDVYREQMVDFILSAL
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Template Sequence  YLSFEGEGHG. FRRKETMVRALEAELSLYAQVF
Template Known Secondary structure  TT

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   617..620...... ...630.........640........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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