Return to main results Retrieve Phyre Job Id

Job DescriptionP77538
Confidence99.87%DateThu Jan 5 12:30:21 GMT 2012
Rank132Aligned Residues202
% Identity14%Templatec2xmzA_
PDB info PDB header:lyaseChain: A: PDB Molecule:hydrolase, alpha/beta hydrolase fold family; PDBTitle: structure of menh from s. aureus
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLV
Query Conservation         
 

  

              

  
  
   
  
 
                                  
Alig confidence 































.







































...



Template Conservation         
 





              
  .   

  
  
 
 
                         ...    
Template Sequence  EANVETNQVLVFLHGFLSDSRTYHNHIEKFTD. NYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYK. . . DKSI
Template Known Secondary structure 

SS

S

TT

GGGGTTTT.TS

TTSTT



TTS


GGGT...TS
Template Predicted Secondary structure 













.





















...



Template SS confidence 















































































   8.10.........20.........30......... 40.........50.........60.........70......... 80...
 
   152.......160.........170.........180........
Predicted Secondary structure 














...........................................
Query SS confidence 




































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LFGQSIGGANILDVIGRGDREGIRAVILDSTFASYAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation      
     
               
          ...........................................
Alig confidence 




































...........................................
Template Conservation                           
 
                                                    
Template Sequence  TLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELP
Template Known Secondary structure  T
SS

SS

S

SS
TTSGGGGGGGGS
Template Predicted Secondary structure 









































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   189190.........200.........210.........220.........230.........240.........250....
Predicted Secondary structure  ..............































Query SS confidence  . . . . . . . . . . . . . .

































































Query Sequence  . . . . . . . . . . . . . . IANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDG
Query Conservation  ..............                             
 


 
  
  

      
         
    
 
Alig confidence  ..............










































.










.









Template Conservation                                          
  
 
 
 
  
    .           .      
   
Template Sequence  VEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV. QIAKKMANLIP. NSKCKLISAT
Template Known Secondary structure  TS
STTTS


GGGGGG

S
TT
.ST.TTT
Template Predicted Secondary structure 






















.

.




Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220 .........230. ........240.
 
   255....260.........270.........280.
Predicted Secondary structure 







Query SS confidence 


























Query Sequence  EHIDAFSDRHGDVYREQMVDFILSALN
Query Conservation   
               
  

     
Alig confidence 






..

















Template Conservation 

    
.. 
      
  

    
Template Sequence  GHTIHVE. . DSDEFDTMILGFLKEEQN
Template Known Secondary structure 
S
..S

Template Predicted Secondary structure 


..


Template SS confidence 


























   242...... .250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions