Job Description P77538 Confidence 99.84% Date Thu Jan 5 12:30:21 GMT 2012 Rank 151 Aligned Residues 172 % Identity 12% Template c2qs9A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:retinoblastoma-binding protein 9; PDBTitle: crystal structure of the human retinoblastoma-binding2 protein 9 (rbbp-9). nesg target hr2978 Resolution 1.72 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		I	I	H	A	H	G	N	A	G	N	M	S	A	H	W	P	L	V	S	W	L	P	E	R	.	.	.	.	.	N	F	N	V	F	M	F	D	Y	R	G	F	G	K	S	K	G	T	P	S	Q	A	G	L	L	D	D	T	Q	S	A	I	N	V	V	R	H	R	S	D	V	N	P	Q	R	L	V	L	F	G	Q
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	I	V	P	G	N	G	G	G	D	V	T	T	H	G	W	Y	G	W	V	K	K	E	L	E	K	I	P	G	F	Q	C	L	A	K	N	X	P	D	P	I	T	A	R	.	.	.	.	.	.	.	.	.	.	.	.	E	S	I	W	L	P	F	X	E	T	E	L	H	C	D	E	K	T	I	I	I	G	H
Template Known Secondary structure								S	S	S	S		T	T	T	S	T	T									T	T	S	T	T									S	S	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.											T	S				T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	G	A	N	I	L	D	V	I	G	R	G	D	R	E	G	I	R	A	V	I	L	D	S	T	F	A	S	Y	A	T	I	A	N	Q	M	I	P	G	S	G	Y	L	L	D	E	S	Y	S	G	E	N	Y	I	A	S	V	S	P	I	P	L	L	L	I	H	G	K	A	D	H	V	I	P	W	Q	H	S
Query Conservation
Alig confidence																.	.	.																											.	.	.	.	.
Template Conservation																.	.	.																											.	.	.	.	.
Template Sequence		S	S	G	A	I	A	A	X	R	Y	A	E	T	H	.	.	.	R	V	Y	A	I	V	L	V	S	A	Y	T	S	D	L	G	D	E	N	E	R	A	S	G	Y	F	.	.	.	.	.	T	R	P	W	Q	W	E	K	I	K	A	N	C	P	Y	I	V	Q	F	G	S	T	D	D	P	F	L	P	W	K	E	Q
Template Known Secondary structure		T													S	.	.	.			S						S			S	S		T	T							T	S	T	T	.	.	.	.	.	S	S												S								T	T		S	S	S
Template Predicted Secondary structure																.	.	.																											.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	Y	S	L	A	K	E	P	K	R	L	I	L	I	P	D	G	E	H	I	D	A	F	S	D	R	H	G	D	V	Y	R	E	Q	M	V	D	F	I	L
Query Conservation
Alig confidence									.	.													.	.											.
Template Conservation									.	.													.	.											.
Template Sequence		Q	E	V	A	D	R	L	.	.	E	T	K	L	H	K	F	T	D	C	G	H	.	.	F	Q	N	T	E	F	H	E	L	I	.	T	V	V	K	S	L	L	K
Template Known Secondary structure									.	.	T							S	S		T	T	.	.	S		S	S							.								T
Template Predicted Secondary structure									.	.													.	.											.
Template SS confidence
		147	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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