Return to main results Retrieve Phyre Job Id

Job DescriptionP77538
Confidence99.88%DateThu Jan 5 12:30:21 GMT 2012
Rank121Aligned Residues210
% Identity16%Templatec2fx5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lipase; PDBTitle: pseudomonas mendocina lipase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  PDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTP
Query Conservation        
       

  
                
 

  

              

  
  
   
  
 
      
Alig confidence 


















...

























































Template Conservation     

             
...  
          



  

              


 
 



             
Template Sequence  DRSGPYTVSSQSEGPSCRI. . . YRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREML
Template Known Secondary structure  TS

S

TTT...SSTTGGG



TT

GGGGT


S

TTS
Template Predicted Secondary structure 











...





























Template SS confidence 















































































   18.20.........30...... ...40.........50.........60.........70.........80.........90....
 
   124.....130.........140.........150.........160.........170.........180.........190.........200...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDE
Query Conservation                                  
     
               
                         
Alig confidence 
.








































...














..................
Template Conservation   .                   

  

 
 


 

  

 

...      
 
   
  .................. 
Template Sequence  A. CLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG. . . QDTRVRTTAPIQPYT. . . . . . . . . . . . . . . . . . L
Template Known Secondary structure  .SSSSTTTTTT...TSTT



..................S
Template Predicted Secondary structure  .














...









..................
Template SS confidence 















































































   95 ....100.........110.........120.........130...... ...140.........150. .
 
   204.....210.........220.........230 .........240.........250.........260.........270.........280
Predicted Secondary structure 














.















Query SS confidence 


























.

















































Query Sequence  SYSGENYIASVSPIPLLLIHGKADHVI. PWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSAL
Query Conservation                
 


 
  
  
.
      
         
    
  
               
  

    
Alig confidence 


























.































..















Template Conservation                
 
   
  
    
          
  
       

 
      ..         


   
Template Sequence  GLGHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGS. . GGAYRGPSTAWFRFQL
Template Known Secondary structure  STT

GGGGG

SS
TT
SSS
T
SS
SS

TTSSTTT..
GGG
Template Predicted Secondary structure 

































..

Template SS confidence 













































































   153......160.........170.........180.........190.........200.........210.. .......220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions