Job Description P77538 Confidence 99.93% Date Thu Jan 5 12:30:21 GMT 2012 Rank 39 Aligned Residues 236 % Identity 14% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		Y	P	D	D	K	I	Y	G	P	D	P	W	S	A	E	S	V	E	F	T	A	K	D	G	T	R	L	Q	G	W	F	I	P	S	S	T	G	P	A	D	N	A	I	A	T	I	I	H	A	H	G	N	A	G	N	M	S	A	.	.	H	W	P	L	V	S	W	L	P	E	R	N	F	N	V	F	M	F	D	Y
Query Conservation																																																												.	.
Alig confidence																																							.	.																				.	.
Template Conservation																																							.	.
Template Sequence		E	P	V	H	L	T	F	D	P	A	D	F	R	V	E	Q	V	F	Y	P	S	K	D	G	T	K	V	P	M	F	I	V	R	R	K	D	A	.	.	K	G	P	L	P	T	L	L	Y	G	Y	G	G	F	N	V	A	L	T	P	W	F	S	A	G	F	M	T	W	I	D	S	G	G	A	F	A	L	A	N	L
Template Known Secondary structure		S					S	S		G	G	G											T	T	S											T	T		.	.		S												T	T																T	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		R	G	F	G	K	S	K	G	T	P	.	.	.	.	.	.	.	S	Q	A	G	L	L	D	D	T	Q	S	A	I	N	V	V	R	H	R	S	D	V	N	P	Q	R	L	V	L	F	G	Q	S	I	G	G	A	N	I	L	D	V	I	G	R	G	D	R	E	G	I	R	A	V	I	L	D	S	T	F	A	S	Y
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																															.
Template Conservation																																																																	.
Template Sequence		R	G	G	G	E	Y	G	D	A	W	H	D	A	G	R	R	D	K	K	Q	N	V	F	D	D	F	I	A	A	G	E	W	L	I	A	N	G	V	T	P	R	H	G	L	A	I	E	G	G	S	N	G	G	L	L	I	G	A	V	T	N	Q	R	.	P	D	L	F	A	A	A	S	P	A	V	G	V	M	D	M
Template Known Secondary structure		T	T	S	S	T	T							T	T	S	G	G	G	T																	T	T	S	S		T	T								T														.	G	G	G		S						S					T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.		.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.												.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																					.	.																										.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																					.	.																										.	.	.
Query Sequence		A	T	I	A	N	Q	M	I	P	G	S	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	L	D	E	S	Y	S	G	E	N	Y	I	A	S	V	S	P	I	.	.	P	L	L	L	I	H	G	K	A	D	H	V	I	P	W	Q	H	S	E	K	L	Y	S	L	A	.	.	.	K	E	P	K	R	L	I	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																					.	.																										.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																					.	.																										.	.	.
Template Conservation
Template Sequence		L	R	F	D	Q	F	T	A	G	R	Y	W	V	D	D	Y	G	Y	P	E	K	E	A	D	W	R	V	L	R	R	Y	S	P	Y	H	N	V	R	S	G	V	D	Y	P	A	I	L	V	T	T	A	D	T	D	D	R	V	V	P	G	H	S	F	K	Y	T	A	A	L	Q	T	A	A	I	G	P	K	P	H	L
Template Known Secondary structure		T	S	G	G	G	S	T	T	G	G	G	G							T	T	S									T	T		G	G	G				T	T	S											S			S	S	S		T													S				S	S
Template Predicted Secondary structure
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	D	G	E	H	I	D	A	F	S	D	R	H	G	D	V	Y	R	E	Q	M	V	D	F	I	L	S	A	L
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		I	R	I	E	P	I	D	K	Q	I	E	E	.	.	.	.	.	.	T	A	D	V	Q	A	F	L	A	H	F	T
Template Known Secondary structure														.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.							.	.	.	700	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions