Phyre 2 alignment of P77538 with c1wb4A

Job Description P77538
Confidence 99.43% Date Thu Jan 5 12:30:21 GMT 2012

Rank 215 Aligned Residues 230

% Identity 10% Template c1wb4A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase y; PDBTitle: s954a mutant of the feruloyl esterase module from2 clostridium thermocellum complexed with sinapinate

Resolution 1.4 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.																		.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.																		.	.	.
Query Sequence	K	I	Y	G	P	D	P	W	S	A	E	S	V	E	F	T	A	K	D	G	T	R	L	Q	G	W	F	I	P	S	S	T	G	P	A	D	N	A	I	A	T	I	I	H	A	H	G	N	A	G	.	.	.	.	.	.	.	N	M	S	A	H	W	P	L	V	S	W	L	P	E	R	N	F	.	.	.	N	V	F
Query Conservation																																																			.	.	.	.	.	.	.																		.	.	.
Alig confidence																							.																												.	.	.	.	.	.	.																		.	.	.
Template Conservation																							.
Template Sequence	L	N	P	C	P	Q	A	G	R	I	V	K	E	T	Y	T	G	I	N	G	T	K	.	S	L	N	V	Y	L	P	Y	G	Y	D	P	N	K	K	Y	N	I	F	Y	L	M	H	G	G	G	E	N	E	N	T	I	F	S	N	D	V	K	L	Q	N	I	L	D	H	A	I	M	N	G	E	L	E	P	L	I	V
Template Known Secondary structure	G	S			S	S												T	T				.								T	T			T	T	S											T	T			T	T	S	T	T	S	T	T	T													T	S	S
Template Predicted Secondary structure																							.
Template SS confidence
	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.		.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.

	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence	M	F	D	Y	R	G	F	G	K	S	K	G	T	P	S	Q	A	G	L	L	D	D	T	Q	S	A	I	N	V	V	R	H	.	.	.	.	.	.	.	.	.	R	S	D	V	N	P	Q	R	L	V	L	F	G	Q	S	I	G	G	A	N	I	L	D	V	I	G	R	G	D	R	E	G	I	R	A	V	I	L	D
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																																						.
Template Sequence	V	T	P	T	F	N	G	G	N	C	T	A	Q	N	F	Y	Q	E	F	R	Q	N	V	I	P	F	V	E	S	K	Y	S	T	Y	A	E	S	T	T	P	Q	G	I	A	A	S	R	M	H	R	G	F	G	G	F	A	M	G	G	L	T	T	W	Y	V	M	V	N	C	.	L	D	Y	V	A	Y	F	M	P	L
Template Known Secondary structure					S		S	T	T			T	T	T								T									S			S		S	S		S						T	T	G	G	G							T														.	T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
	899	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.		.	.	970	.	.	.	.	.	.	.

	181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.												.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	S	T	F	A	S	Y	A	T	I	A	N	Q	M	I	P	G	S	G	Y	L	L	D	E	S	Y	S	G	E	N	Y	I	A	S	V	S	P	I	P	L	L	L	I	H	G	K	A	D	H	V	I	P	W	Q	H	S	E	K	L	Y	S	L	A	K	E	.	.	.	.	.	.	.	.	.	.	.	P	K	R	L	I
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence	S	G	D	Y	W	Y	.	.	.	.	.	.	G	N	S	P	Q	D	K	A	N	S	I	A	E	A	I	N	R	S	G	L	S	K	R	E	Y	F	V	F	A	A	T	G	S	E	D	I	A	Y	A	N	M	N	P	Q	I	E	A	M	K	A	L	P	H	F	D	Y	T	S	D	F	S	K	G	N	F	Y	F	L
Template Known Secondary structure	S					S	.	.	.	.	.	.	S	S	S																T			T	T	S									T	T		T	T													T	S	T	T			B	B	S		T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
	978	.	980	.	.	.							.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.

	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	I	P	D	G	E	H	I	D	A	F	S	D	R	H	G	D	V	Y	R	E	Q	M	V	D	F	I	L	S	A	L	N
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence	V	A	P	G	A	T	H	W	W	G	Y	.	.	.	.	V	R	H	Y	I	Y	D	A	L	P	Y	F	F	H	E	L	E
Template Known Secondary structure			T	T			S	S				.	.	.	.									G	G	G	S	S		T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
	1052	.	.	.	.	.	.	.	1060	.	.					.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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