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Job DescriptionP77538
Confidence77.09%DateThu Jan 5 12:30:21 GMT 2012
Rank277Aligned Residues142
% Identity13%Templatec1bcrA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:serine carboxypeptidase ii; PDBTitle: complex of the wheat serine carboxypeptidase, cpdw-ii, with the2 microbial peptide aldehyde inhibitor, antipain, and arginine at room3 temperature
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90... ...... 100.........110..
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Query Sequence  VEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSA. HWPLVS. . . . . . . . . . . . . . . . . . WLPERNFNVFMFD
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Template Sequence  ITVDEGAGRSLFYLLQEAPEDAQPA. . PLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV. ANVLFLD
Template Known Secondary structure  TTTT


GGG
S
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TTT

TTTTTSSS
GGG


TT
GGGT.S
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   21........30.........40..... ....50.........60.........70.........80.........90 .......
 
   113. .....120.........130.........140.. .......150.........160......... 170........
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Query Sequence  YR. GFGKSKGTPSQAGLLDDTQSAINVVRHR. . . . . . . . SDVNPQRLVLFGQSIGGANILDVIGRG. . . . . DREGIRAVI
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Template Sequence  SPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFM
Template Known Secondary structure 
STTSTT
B
SSGGGGGT

SGGGTT
TTT
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   179180.........190......
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Query Sequence  LDSTFASYATIANQMIPG
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Template Sequence  VGNGLIDDYHDYVGTFEF
Template Known Secondary structure  S



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   174.....180.........190.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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