Return to main results Retrieve Phyre Job Id

Job DescriptionP76466
Confidence9.80%DateThu Jan 5 12:23:12 GMT 2012
Rank70Aligned Residues18
% Identity28%Templatec2kafA_
PDB info PDB header:viral protein, rna binding proteinChain: A: PDB Molecule:non-structural protein 3; PDBTitle: solution structure of the sars-unique domain-c from the2 nonstructural protein 3 (nsp3) of the severe acute3 respiratory syndrome coronavirus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160....... ..170.
Predicted Secondary structure 







...


Query SS confidence 













. . .



Query Sequence  GRYVIYHTGSATKT. . . DNGM
Query Conservation 
   




  
  ...
  
Alig confidence 













...



Template Conservation 




















Template Sequence  GDKIVYHTLESPVEFHLDGEV
Template Known Secondary structure  TT
SSSS

TT
Template Predicted Secondary structure 






Template SS confidence 




















   36...40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions