Return to main results Retrieve Phyre Job Id

Job DescriptionP75843
Confidence91.97%DateThu Jan 5 12:14:56 GMT 2012
Rank2Aligned Residues51
% Identity10%Templated1z6ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220.........230.........240.........250......
Predicted Secondary structure 











Query SS confidence 


















































Query Sequence  EAEIIMLDNSARSLGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHV
Query Conservation 

   

 


 
 



  


 
 

           
    

  
 
Alig confidence 


















































Template Conservation    
   

  
   
  

 


  



  


 

 

   


 
 
 
Template Sequence  QTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEXLEAHLVQELGL
Template Known Secondary structure  SS
S

TT

TS

Template Predicted Secondary structure 












Template SS confidence 


















































   15....20.........30.........40.........50.........60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions