Job Description P75843 Confidence 29.85% Date Thu Jan 5 12:14:56 GMT 2012 Rank 67 Aligned Residues 107 % Identity 10% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	A	Q	L	I	Q	H	I	H	D	K	G	P	V	R	S	A	D	F	E	H	P	R	K	G	A	S	G	W	W	E	W	K	P	H	K	R	H	L	E	G	L	F	T	A	G	K	V	M	V	I	E	R	R	N	F	Q	R	V	Y	D	L	T	H	R	V	M	P	D	W	D	D	E	R	D	L	V	S
Query Conservation
Alig confidence																																.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	A	E	W	D	V	X	N	I	I	W	D	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	.	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	.	K	S	E	N	I	Y	F	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	I	K
Template Known Secondary structure														S	S	S												T	T	S		.																T	T	S					.			T	T						.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70														.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		Q	T	E	A	E	I	I	M	L	D	N	S	A	R	S	L	G	I	F	R	E	Q	W	L	A	D	Y	Y	.	.	.	.	R	L	K	R	P	A	L	A	A	W	R	E	A	R
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		E	D	D	I	K	X	K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L
Template Known Secondary structure																			T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions