Job Description P75843 Confidence 41.53% Date Thu Jan 5 12:14:56 GMT 2012 Rank 38 Aligned Residues 106 % Identity 13% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	Q	H	I	H	D	K	G	P	V	R	S	A	D	F	E	H	P	R	K	G	A	S	G	W	W	E	W	K	P	H	K	R	H	L	E	G	L	F	T	A	G	K	V	M	V	I	E	R	R	N	F	Q	R	V	Y	D	L	T	H	R	V	M	P	D	W	D	D	E	R	D	L	V	S	Q	T	E	A
Query Conservation
Alig confidence																												.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	M	N	I	I	W	M	K	K	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	.	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	.	K	D	N	K	I	F	Q	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	V	E	E	S	D	I
Template Known Secondary structure											S	S																.																	T	S					.			T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																												.																							.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70														.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		E	I	I	M	L	D	N	S	A	R	S	L	G	I	F	R	E	Q	W	L	A	D	Y	Y	.	.	.	.	R	L	K	R	P	A	L	A	A	W	R	E	A	R	A	E	Q
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N	K	K
Template Known Secondary structure														S	T	T													S															T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions