Job Description P75843 Confidence 30.55% Date Thu Jan 5 12:14:56 GMT 2012 Rank 65 Aligned Residues 109 % Identity 15% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	I	A	Q	L	I	Q	H	I	H	D	K	G	P	V	R	S	A	D	F	E	H	P	R	K	G	A	S	G	W	W	E	W	K	P	H	K	R	H	L	E	G	L	F	T	A	G	K	V	M	V	I	E	R	R	N	F	Q	R	V	Y	D	L	T	H	R	V	M	P	D	W	D	D	E	R	D	L	V
Query Conservation
Alig confidence																													.	.	.	.	.																										.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.																										.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	A	I	W	Q	K	A	E	P	L	F	G	D	E	P	W	W	V	R	D	L	A	K	E	T	G	.	.	.	.	.	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	D	.	.	.	.	R	Y	Y	R	N	D	R	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										G	G	G		S	S	S											T	T	.	.	.	.	.																T	T	S						T	T	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.																										.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.						.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.					.	.	.	.	.	.	.	550
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	T	E	A	E	I	I	M	L	D	N	S	A	R	S	L	G	I	F	R	E	Q	W	L	A	D	Y	Y	R	L	K	R	P	A	L	A	A	W	R	E	A	R	A	E	Q	Q	Q	I	I	A	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	E	F	A	N	M	I	R	D	L	D	Q	E	C	G	S	T	C	A	A	D	F	R	D	R	L	G	V	G	R	K	L	A	I	Q	I	L	E	Y	F	D	R	I	G	F	T	R	R	R
Template Known Secondary structure		.	.	.															S	S											T	S																T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions