Job Description P75843 Confidence 49.16% Date Thu Jan 5 12:14:56 GMT 2012 Rank 24 Aligned Residues 61 % Identity 18% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	Q	H	I	H	D	K	G	P	V	R	S	A	D	F	E	H	P	R	K	G	A	S	G	W	W	E	W	K	P	H	K	R	H	L	E	G	L	F	T	A	G	K	V	M	V	I	E	R	R	N	F	Q	R	V	Y	D	L	T	H	R	V	M	P	D	W	D	D	E
Query Conservation
Alig confidence																								.	.	.	.	.																																.	.	.	.	.
Template Conservation																								.	.	.	.	.																																.	.	.	.	.
Template Sequence		K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	.	.	.	.	.	W	E	A	V	R	S	K	S	A	L	D	E	M	V	A	N	G	L	L	W	I	D	Y	Q	G	G	A	E	A	L	Y	.	.	.	.	.	W	D	P	S	W	I	T	R
Template Known Secondary structure						T	T	T	T	T	S			B										.	.	.	.	.			S													T	T	S	S					S	S	S	S	S				.	.	.	.	.			G	G	G	G	G
Template Predicted Secondary structure																								.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions