Return to main results Retrieve Phyre Job Id

Job DescriptionP0A972
Confidence94.41%DateThu Jan 5 11:09:31 GMT 2012
Rank23Aligned Residues63
% Identity16%Templated2ix0a1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20....... ..30.........40.........50..... ....60.........
Predicted Secondary structure 











..











....





Query SS confidence 


























. .



























. . . .













Query Sequence  MSKIKGNVKWFNESKGFGFITPEDGSK. . DVFVHFSAIQTNGFKTLAEGQRVEFEIT. . . . NGAKGPSAANVIAL
Query Conservation 
    
 

     





  
    ..


 
 
 
       
  
  
 
   ....    
  
  
  
Alig confidence 








...














..












...











....













Template Conservation 





   ...      





 

   
 
         ...
  

 
 


   
        
 
 
 
Template Sequence  LTRFVGKVQ. . . GKNDRLAIVPDHPLLKDAIPCRAARGLNHE. . . FKEGDWAVAEMRRHPLKGDRSFYAELTQYI
Template Known Secondary structure 

...S
SSSS
TT

S

TT



...

TT

GGGT
SS

Template Predicted Secondary structure 

...



















...













Template SS confidence 










































































   83......90. ........100.........110.........120. ........130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions