Return to main results Retrieve Phyre Job Id

Job DescriptionP0A972
Confidence96.76%DateThu Jan 5 11:09:31 GMT 2012
Rank20Aligned Residues54
% Identity26%Templated1a62a2
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20...... ...30.........40.........50.........60.........
Predicted Secondary structure 








.....


















Query SS confidence 













. . . . .










































Query Sequence  ESKGFGFITPEDGS. . . . . KDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL
Query Conservation    





  
   ..... 


 
 
 
       
  
  
 
       
  
  
  
Alig confidence 













.....













...

























Template Conservation    






    

   
 




 
 



 ...

 

 
 
 

 
   

  

  
Template Sequence  LQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFN. . . LRTGDTISGKIRPPKEGERYFALLKV
Template Known Secondary structure 
TTS

GGGTT


TT

TT...

TT



TT

S
Template Predicted Secondary structure 






















...













Template SS confidence 





























































   58.60.........70.........80.........90 .........100.........110......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions