Job Description P0A972 Confidence 25.54% Date Thu Jan 5 11:09:31 GMT 2012 Rank 77 Aligned Residues 63 % Identity 13% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		M	S	K	I	K	G	N	V	K	W	F	N	E	S	K	G	F	G	F	I	T	P	E	D	G	S	K	D	V	F	V	H	F	S	A	I	Q	T	N	G	F	K	T	L	.	.	.	.	.	A	E	G	Q	R	V	E	F	E	I	T	N	G	A	K	G	P	S	A	A	N	V	I
Query Conservation																																														.	.	.	.	.
Alig confidence				.											.	.	.																													.	.	.	.	.
Template Conservation				.											.	.	.
Template Sequence		S	I	.	I	P	V	R	V	E	R	F	W	H	.	.	.	N	D	I	I	C	T	T	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A	N	I	T	A	E	V	S
Template Known Secondary structure				.										S	.	.	.	S							T	T	S							T	T	S	S	S	S	T	T	S		S		S	T	T	T	S		T	T												G	G	G	T
Template Predicted Secondary structure				.											.	.	.
Template SS confidence
		1136	.		.	.	1140	.	.	.	.	.	.	.				.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions