Return to main results Retrieve Phyre Job Id

Job DescriptionP0A972
Confidence99.55%DateThu Jan 5 11:09:31 GMT 2012
Rank17Aligned Residues63
% Identity32%Templatec2ytvA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fifth cold-shock domain of the human2 kiaa0885 protein (unr protein)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20. ........30.........40.........50.........60 .........
Predicted Secondary structure 



.





















..

Query SS confidence 


















.






































. .








Query Sequence  KIKGNVKWFNESKGFGFIT. PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG. . PSAANVIAL
Query Conservation     
 

     





 . 
    


 
 
 
       
  
  
 
       
..  
  
  
Alig confidence 










..





.
















..



















..








Template Conservation     
 
 


 .. 



        




 
 
  ..   
  

 


 
    
 

  

 
  
Template Sequence  LRRATVECVKD. . QFGFINYEVGDSKKLFFHVKEVQD. . GIELQAGDEVEFSVILNQRTGKCSACNVWRV
Template Known Secondary structure  B



S..SS


SSSSSTTT

S..S



TT

B

SSS



S

Template Predicted Secondary structure 

..











..














Template SS confidence 





































































   8.10........ .20.........30.........40.. .......50.........60.........70...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions