Return to main results Retrieve Phyre Job Id

Job DescriptionP11447
Confidence100.00%DateThu Jan 5 11:32:38 GMT 2012
Rank10Aligned Residues430
% Identity23%Templated1re5a_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDA
Query Conservation   

 

           
  
   
  
    
    
    
   


  
 
  
  

  
                
Alig confidence 







..









.....






















































Template Conservation        
 ..  
   


 .....   
     

 
 
 
    



   
 

  
      
             
Template Sequence  QLFDAYFT. . APAMREIFSD. . . . . RGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGN
Template Known Secondary structure 
TTS..
TS.....TTTSS


GGGS
SS
Template Predicted Secondary structure 





..


.....











Template SS confidence 















































































   4.....10. ........20. ........30.........40.........50.........60.........70......
 
   82.... ...90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 

..
















Query SS confidence 




. .








































































Query Sequence  EDIHS. . WVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQR
Query Conservation 


  .. 

  
    
     

 
 



   

  
  
  
  
   
  
   
   
     
 
 



 
 
Alig confidence 




..








































































Template Conservation   
   
  
              

 
 




  

  
 

  
  
   
  
   
   
     
 
 



 
 
Template Sequence  SAIPLVKALGKVIATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQH
Template Known Secondary structure  S
GGGGGGTTTT

TTT
TT
Template Predicted Secondary structure 


















Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   160.........170.........180.........190.........200.........210...... ...220.........230........
Predicted Secondary structure 


















.












Query SS confidence 
























































.





















Query Sequence  AQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWL. GFASATRNSLDSVSDRDHVLEL
Query Conservation 
 
 
 
         
 
   

           

 


 

    

   
  
.

     

      

   
 
Alig confidence 
























































.





















Template Conservation 
 
 
 
         
 
   

          




 

              
   


          

   
 
Template Sequence  ATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLPEQPWHTQRDRLVEF
Template Known Secondary structure  SB




TTSS
GGGGGGT
B

SS

TT

Template Predicted Secondary structure 





























Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   239240.........250.........260.........270.........280.........290.........300.........310........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYN
Query Conservation     

  
  
 


 

   

 
 
 
 
      


 

 



   
 
   
    
                 
Alig confidence 




























........





.



































Template Conservation     

 

  
 


 

 
 
  
 


........ 

 

.



   
 
   
    
             


 
Template Sequence  ASVLGLVAGSLGKFGRDISLLMQTEAGEV. . . . . . . . FEPSAP. KRNPVGAAVLIGAATRVPGLLSTLFAAMPQEHERSL
Template Known Secondary structure  TSTTT

........




.



T



TT

S
Template Predicted Secondary structure 






........





.










Template SS confidence 















































































   237..240.........250.........260..... ....270. ........280.........290.........300.......
 
   319320.........330.........340.........350.........360. ........370.........380.........390......
Predicted Secondary structure 


..







Query SS confidence 










































. .


































Query Sequence  KDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQ. . QGYANATELADYLVAKGVPFREAHHIVGEAVVEAI
Query Conservation   
       
          
     

  
 

 


   
 ..     

 

  

  
   
 

  
  
   
 
Alig confidence 










































..













.



















Template Conservation           
          
      
 

 
  


   
  
     

     
 .  

   

  
  
   
 
Template Sequence  GLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLA. QRLGRDRAHHLLEQCCQRAV
Template Known Secondary structure  STTTT

TTSTTGGG.S
Template Predicted Secondary structure 








.



Template SS confidence 















































































   318.320.........330.........340.........350.........360.........370...... ...380.........390......
 
   397..400.........410.........420.........430.........440.........450.....
Predicted Secondary structure 



















Query SS confidence 


























































Query Sequence  RQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQAR
Query Conservation    
  
  
              

   


   
  
   

 

  
   
      
Alig confidence 


































.......
















Template Conservation    
  
 
           
   

   


   
.......
 
   
 
        
Template Sequence  AEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYL. . . . . . . GQARVWVARAVSEHQRF
Template Known Secondary structure  TT

T
S
T
GGG

.......TT
Template Predicted Secondary structure 














.......

Template SS confidence 


























































   397..400.........410.........420.........430. ........440........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions