Return to main results Retrieve Phyre Job Id

Job DescriptionP11447
Confidence100.00%DateThu Jan 5 11:32:38 GMT 2012
Rank2Aligned Residues449
% Identity41%Templated1i0aa_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIH
Query Conservation 

           
  
   
  
    
    
    
   


  
 
  
  

  
                


 
Alig confidence 






































































.







Template Conservation 

              
   
  
    
 

 
 
  
   


    
  
  

  
           .     

 
Template Sequence  GRFVGSVDPIMEILSSSISTEQRLTEVDIQASMAYAKALEKASILTKTELEKILSGLEKISEESSKGVLVM. TQSDEDIQ
Template Known Secondary structure 




S

GGGGGGS

GGGTTSS
TT



.
TTS
S
Template Predicted Secondary structure 






















.





Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80. ........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  SWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTF
Query Conservation    

  
    
     

 
 



   

  
  
  
  
   
  
   
   
     
 
 



 
 
 
 
 
Alig confidence 















































































Template Conservation    

  
    
     

 
 




  

  
 

 

  
   
  
   
   
     
 
 



 
 
 
 
 
Template Sequence  TAIERRLKELIGDIAGKLQTGRSRNEQVVTDLKLLLKSSISVISTHLLQLIKTLVERAAIEIDIIMPGYTHLQKALPIRW
Template Known Secondary structure 
GGGGGGGTT

TTT
TT
Template Predicted Secondary structure 

















Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  AHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIG
Query Conservation 
         
 
   

           

 


 

    

   
  


     

      

   
    

  
Alig confidence 















































































Template Conservation 
  
      
 
   

           

  
  

    

   
  


      
      

   
    
  
Template Sequence  SQFLLSHAVALTRDSERLGEVKKRITVLPLGSGVLAGNPLEIDRELLRSELDMTSITLNSIDAISERDFVVELISVATLL
Template Known Secondary structure  T

S
TTTT

SS


T
S
S


Template Predicted Secondary structure 

































Template SS confidence 















































































   170.........180.........190.........200.........210.........220.........230.........240.........
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDK
Query Conservation 
  
 


 

   

 
 
 
 
      


 

 



   
 
   
    
                  
     
Alig confidence 















































































Template Conservation     
 


 

    
 
 
 
        


 

 



   
 

  
    
                  
     
Template Sequence  MIHLSKLAEDLIIFSTTEFGFVTLSDAYSTGSSLLPQKKNPDSLELIRSKAGRVFGRLAAILMVLKGIPSTFSKDLQEDK
Template Known Secondary structure  TSTTT
S

GGG

SS
TT

TT

SS

GGGGG
Template Predicted Secondary structure 
































Template SS confidence 















































































   250.........260.........270.........280.........290.........300.........310.........320.........
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  EGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDL
Query Conservation    
          
     

  
 

 


   
      

 

  

  
   
 

  
  
   
   
  
  
Alig confidence 






































.







































Template Conservation    
          
      
  
 
  


        . 

 

  
   
   
 

  
   
  
   
      
Template Sequence  EAVLDVVDTLTAVLQVATGVISTLQINKENMEKALTPEL. LSTDLALYLVRKGMPIRQAQTASGKAVHLAETKGITINNL
Template Known Secondary structure 

T

GGG.GTT

TTS
GGG
Template Predicted Secondary structure 







.








Template SS confidence 















































































   330.........340.........350.........360........ .370.........380.........390.........400........
 
   406...410.........420.........430.........440.........450......
Predicted Secondary structure 















Query SS confidence 


















































Query Sequence  PLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARL
Query Conservation                

   


   
  
   

 

  
   
      
Alig confidence 


















































Template Conservation            
   

   


   
  
   

 
   
   
      
Template Sequence  TLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELL
Template Known Secondary structure 
TT
TT

GGGGGGS
TT

STTSSS
Template Predicted Secondary structure 













Template SS confidence 


















































   409410.........420.........430.........440.........450.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions