Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 31 Aligned Residues 339 % Identity 21% Template c3r6yG_ PDB info PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																							.																																																							.	.	.	.
Query SS confidence																							.																																																							.	.	.	.
Query Sequence		A	L	W	G	G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	.	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	.	.	.	.
Query Conservation																							.																																																							.	.	.	.
Alig confidence						.	.	.	.														.																																																							.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		A	Y	Y	G	.	.	.	.	V	Q	T	I	R	A	T	E	N	F	P	I	T	G	Y	R	I	H	P	E	L	I	K	S	L	G	I	V	K	K	S	A	A	L	A	N	M	E	V	G	L	L	D	K	E	V	G	Q	Y	I	V	K	A	A	D	E	V	I	E	G	K	W	N	D	Q	F	I	V	D	P	I	Q
Template Known Secondary structure			S			.	.	.	.												S	S																										T	T	S	S																	T	T	T	T	T	T	T					S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		21	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
					77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.																						.						.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																						.						.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	E	S	D	A	E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	.	Q	L	G	K	K	.	.	.	.	.	.	.	.	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	C	K	D	T	V	S	E	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A	Q
Query Conservation		.	.	.																						.						.	.	.	.	.	.	.	.
Alig confidence		.	.	.																						.						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	A	G	T	S	I	N	M	N	A	N	E	V	I	A	N	R	A	L	E	L	M	G	E	E	K	G	N	Y	S	K	I	S	P	N	S	H	V	N	M	S	Q	S	T	N	D	A	F	P	T	A	T	H	I	A	V	L	S	L	L	N	Q	L	I	E	T	T	K	Y	M	Q	Q	E	F	M	K	K	A	D
Template Known Secondary structure		S	G	G	G																			T	T			T	T		T	T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		N	N	Q	D	A	V	M	P	G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	R	.	.	.	.	.	.	.	E	Q	L	A	G	W	L	G
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																																																									.										.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		E	F	A	G	V	I	K	M	G	R	T	H	L	Q	D	A	V	P	I	L	L	G	Q	E	F	E	A	Y	A	R	V	I	A	R	D	I	E	R	I	A	N	T	R	N	N	L	Y	D	I	N	M	G	A	T	A	.	V	G	T	G	L	N	A	D	P	E	Y	I	S	I	V	T	E	H	L	A	K	F	S	G
Template Known Secondary structure			S	S	S								T	T																												T	T	S	G	G	G	S				T	T		T	T	.	T	S	S		S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		218	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure				.																																																																	.	.	.
Query SS confidence				.																																																																	.	.	.
Query Sequence		F	A	.	S	A	T	R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	.	.	.	K	N	P	D	A	L	E	L	I	R
Query Conservation				.																																																																	.	.	.
Alig confidence				.																																																	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		H	P	L	R	S	A	Q	H	L	V	D	A	T	Q	N	T	D	C	Y	T	E	V	S	S	A	L	K	V	C	M	I	N	M	S	K	I	A	N	D	L	R	L	M	A	S	G	P	R	A	G	L	.	.	.	.	.	.	.	.	S	E	I	V	L	P	A	R	Q	P	G	V	N	P	V	M	P	E	V	M	N
Template Known Secondary structure		S						S	S	T	T																																		T			S	S	S	S		.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.									.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	K	C	G	R	V	Q	G	A	L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	.	V	L	D	G	I	Q	V	K	R
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		Q	V	A	F	Q	V	F	G	N	D	L	T	I	T	S	A	S	E	A	G	Q	F	E	L	N	V	M	E	P	V	L	F	F	N	L	I	Q	S	I	S	I	M	T	N	V	F	K	S	F	T	E	N	C	L	K	G	I	K	A	N	E
Template Known Secondary structure																						B	T	T	B		T	T																										T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions