Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 21 Aligned Residues 390 % Identity 22% Template c3ocfB_ PDB info PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																																																								.
Query SS confidence																							.	.	.																																																								.
Query Sequence		A	L	W	G	G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	.	.	.	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	L	.
Query Conservation																							.	.	.																																																								.
Alig confidence						.	.	.	.														.	.	.																																																								.
Template Conservation						.	.	.	.
Template Sequence		A	Y	F	G	.	.	.	.	I	Q	T	L	R	A	V	E	N	F	S	L	S	D	V	A	L	N	H	I	P	A	L	V	R	A	L	A	M	V	K	K	A	A	A	T	A	N	Y	K	L	R	Q	L	P	E	P	K	Y	A	A	I	V	A	A	C	D	D	I	I	D	G	L	L	M	E	Q	F	V	V	D	V
Template Known Secondary structure			S	S		.	.	.	.										S			S	S		B	G	G	G	S																					T	T	S	S																	T	T	T	T	G	G	G				B	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		18	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
								78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	S	D	A	E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	Q	L	G	K	.	.	.	.	.	.	.	.	.	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	C	K	D	T	V	S	E	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T
Query Conservation		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	G	G	A	G	T	S	S	N	M	N	A	N	E	V	I	A	N	R	A	L	E	H	L	G	R	P	R	G	D	Y	Q	T	I	H	P	N	D	D	V	N	M	S	Q	S	T	N	D	V	Y	P	T	A	V	R	L	A	L	L	L	S	Q	N	Q	V	Q	T	A	L	H	R	L	I	A	A	F	E	A	K
Template Known Secondary structure		T		S	S	T	T																			T	T			T	T		T	T	T	S							T	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	N	N	Q	D	A	V	M	P	G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	R	E	Q	L	A	G	W	L	G	F	A	S	A	T
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	R	E	F	A	T	V	I	K	I	G	R	T	Q	L	Q	D	A	V	P	I	T	L	G	Q	E	F	E	A	F	A	A	T	L	R	E	D	T	A	R	L	E	E	V	A	A	L	F	R	E	V	N	L	G	G	H	A	Y	A	E	Q	A	I	V	E	L	S	Q	I	S	G	I	E	L	K	A	T	.	.	.
Template Known Secondary structure					T	T	T								T	T																																G	G	G				T	T																	T	S						.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	.	.	.	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K	C	G	R	V
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.								.
Template Conservation																																																					.
Template Sequence		G	N	L	V	E	A	S	W	D	T	G	A	F	V	T	F	S	G	I	L	R	R	I	A	V	K	L	S	K	I	A	N	D	L	R	L	L	S	S	G	P	R	S	G	L	G	E	I	R	L	P	.	A	V	Q	P	G	S	S	I	M	P	G	K	V	N	P	V	I	P	E	S	V	N	Q	V	C	Y	Q	V
Template Known Secondary structure		S						T	T																														T			S	S	S	S								.			S				T	T	S	T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		Q	G	A	L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	.	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	Q	G	Y	A	N	A	T	E	L	A	D	Y	L	V	A	K	G
Query Conservation																																															.
Alig confidence																																															.																															.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	G	N	D	L	T	V	T	M	A	A	E	S	G	Q	L	Q	L	N	A	F	E	P	L	I	V	Y	N	I	L	S	S	M	R	L	L	G	R	A	M	T	N	L	A	E	R	C	V	D	G	I	E	A	N	V	E	R	C	R	A	G	A	E	E	S	I	S	L	A	T	A	L	V	P	V	V	.	.	.	.
Template Known Secondary structure														T		B	T	T	B		T	T																										T	G	G	G														T		G	G	G	G	G	G	G					.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	F	R	E	A	H	H	I	V	G	E	A	V	V	E	A	I	R	Q	G	K	P	L	E	D	L	P	L	S
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	Y	A	R	A	A	E	I	A	K	Q	A	L	A	S	G	Q	T	V	M	E	V	A	I	S
Template Known Secondary structure		.	.	.	.	.														T	T	S								T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440