Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 18 Aligned Residues 413 % Identity 19% Template c3no9C_ PDB info PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis Resolution 2.48 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.
Predicted Secondary structure																							.																																																							.	.	.
Query SS confidence																							.																																																							.	.	.
Query Sequence		A	L	W	G	G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	.	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	.	.	.	L
Query Conservation																							.																																																							.	.	.
Alig confidence						.	.	.	.														.																																																							.	.	.
Template Conservation						.	.	.	.
Template Sequence		A	L	W	R	.	.	.	.	A	Q	T	Q	R	A	V	E	N	F	P	I	S	G	R	G	L	E	R	T	Q	I	R	A	L	G	L	L	K	G	A	C	A	Q	V	N	S	D	L	G	L	L	A	P	E	K	A	D	A	I	I	A	A	A	A	E	I	A	D	G	Q	H	D	D	Q	F	P	I	D	V	F	Q
Template Known Secondary structure						.	.	.	.												S	S	S																									T	T	S	S																	T	T	T	T	T	T	S					S	S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		26	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																							.	.	.	.	.	.																							.
Query SS confidence																							.	.	.	.	.	.																							.
Query Sequence		E	S	D	A	E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	Q	.	.	.	.	.	.	L	G	K	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	.	C	K	D	T	V	S	E	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A	Q	N	N	Q	D	A	V
Query Conservation																							.	.	.	.	.	.																							.
Alig confidence																							.	.	.	.	.	.																							.
Template Conservation
Template Sequence		T	G	S	G	T	S	S	N	M	N	T	N	E	V	I	A	S	I	A	A	K	G	G	V	T	L	H	P	N	D	D	V	N	M	S	Q	S	S	N	D	T	F	P	T	A	T	H	I	A	A	T	E	A	A	V	A	H	L	I	P	A	L	Q	Q	L	H	D	A	L	A	A	K	A	L	D	W	H	T	V	V
Template Known Secondary structure			T	T																		T	T	T										T	T	T																						T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.			220	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.											.	.
Query SS confidence																																																													.	.	.	.	.	.	.											.	.
Query Sequence		M	P	G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	R	.	.	.	.	.	.	.	E	Q	L	A	G	W	L	G	F	A	.	.	S	A
Query Conservation																																																													.	.	.	.	.	.	.											.	.
Alig confidence																																																			.										.	.	.	.	.	.	.											.	.
Template Conservation																																																			.
Template Sequence		K	S	G	R	T	H	L	M	D	A	V	P	V	T	L	G	Q	E	F	S	G	Y	A	R	Q	I	E	A	G	I	E	R	V	R	A	C	L	P	R	L	G	E	L	A	I	G	G	T	A	.	V	G	T	G	L	N	A	P	D	D	F	G	V	R	V	V	A	V	L	V	A	Q	T	G	L	S	E	L	R	T
Template Known Secondary structure							T	T																												T	T					T				T	T		T	T	.	T	S	S		T	T	S		T	T																T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K	C	G	R	V	Q	G
Query Conservation
Alig confidence																																																.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		A	A	N	S	F	E	A	Q	A	A	R	D	G	L	V	E	A	S	G	A	L	R	T	I	A	V	S	L	T	K	I	A	N	D	I	R	W	M	G	S	G	P	L	T	G	L	.	.	.	.	A	E	I	Q	L	P	D	L	Q	P	G	K	V	N	P	V	L	P	E	A	V	T	Q	V	A	A	Q	V	I	G
Template Known Secondary structure			S	S	T	T																																		T			T	T	T	S		.	.	.	.								S
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		A	L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	.	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	Q	G	Y	A	N	A	T	E	L	A	D	Y	L	V	A	K	G	V	P
Query Conservation																																													.
Alig confidence																																													.																												.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		N	D	A	A	I	A	W	G	G	A	N	G	A	F	E	L	N	V	Y	I	P	M	M	A	R	N	I	L	E	S	F	K	L	L	T	N	V	S	R	L	F	A	Q	R	C	I	A	G	L	T	A	N	V	E	H	L	R	R	L	A	E	S	S	P	S	I	V	T	P	L	N	.	.	.	.	.	S	A	I	G
Template Known Secondary structure												T		B	T	T	B																													T	T	T	T													T	T		G	G	G		S	G	G	G	.	.	.	.	.	G	T	S
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.						.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	E	A	H	H	I	V	G	E	A	V	V	E	A	I	R	Q	G	K	P	L	E	D	L	P	L	S	E	L	Q	K	F	S	Q	V	I	D	E	D	V	Y	P	I	L	S	L	Q	S	C	L	D	K
Query Conservation
Alig confidence												.	.	.	.																.
Template Conservation												.	.	.	.																.
Template Sequence		Y	E	E	A	A	A	V	A	K	Q	.	.	.	.	A	L	K	E	R	K	T	I	R	Q	T	V	I	D	R	.	G	L	I	G	D	L	S	I	E	D	L	D	R	R	L	D	V	L	A	M	A	K	A
Template Known Secondary structure												.	.	.	.					T											.	T														T						T	T
Template Predicted Secondary structure												.	.	.	.																.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.