Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 28 Aligned Residues 356 % Identity 18% Template c3gtdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																																								.	.	.
Query SS confidence																							.																																																								.	.	.
Query Sequence		A	L	W	G	G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	.	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	L	.	.	.
Query Conservation																							.																																																								.	.	.
Alig confidence						.	.	.	.														.																																																								.	.	.
Template Conservation						.	.	.	.
Template Sequence		F	Y	W	G	.	.	.	.	A	Q	T	Q	R	S	L	N	N	F	K	I	S	K	Q	K	M	P	K	I	L	I	R	A	L	A	I	L	K	K	C	A	A	Q	V	N	Y	E	F	G	D	L	E	Y	K	I	A	T	S	I	D	K	A	I	D	R	I	L	A	G	E	F	E	D	N	F	P	L	V	V	W	Q
Template Known Secondary structure						.	.	.	.														S		B																							T	T		S																	T	T	T	T	G	G	G				B	S	S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
						78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.																									.	.	.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.																									.	.	.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	E	S	D	A	E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	Q	L	G	K	.	.	.	.	.	.	.	.	.	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	.	W	C	K	D	T	V	S	E	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A
Query Conservation		.	.	.	.																									.	.	.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.																									.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		T	G	S	G	T	Q	T	N	M	N	M	N	E	V	I	A	S	I	A	N	E	E	L	T	G	K	K	G	G	K	F	P	V	H	P	N	D	H	V	N	K	G	Q	S	S	N	D	S	F	P	T	A	M	H	I	A	T	V	L	A	T	K	Q	Q	L	I	P	A	L	N	N	L	L	T	Y	L	Q	D	K	S
Template Known Secondary structure			T	T																						S	S		S	S	S	S	S	S							T	T	T																						T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		Q	N	N	Q	D	A	V	M	P	G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	R	.	.	.	.	.	.	.	E	Q	L	A	G	W	L
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence																																																										.										.	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		K	D	W	D	K	I	I	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	K	Q	E	F	S	G	Y	I	T	Q	I	E	Y	A	L	E	R	I	E	D	A	L	K	K	V	Y	L	L	A	Q	G	G	T	A	.	V	G	T	G	I	N	S	K	I	G	F	D	I	K	F	A	Q	K	V	A	E	F	T
Template Known Secondary structure		T	T		T	T								T	T																															T	T	T	T				T	T		T	T	.	T	S	S		T	T	S		T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		217	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	F	A	.	S	A	T	R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K
Query Conservation					.
Alig confidence					.																																															.	.
Template Conservation																																																				.	.
Template Sequence		Q	Q	P	F	K	T	A	P	N	K	F	E	S	L	A	A	H	D	A	L	V	E	F	S	G	T	L	N	T	I	A	V	S	L	M	K	I	A	N	D	I	R	L	L	G	S	G	P	R	C	.	.	G	L	G	E	L	H	L	P	E	N	E	P	M	P	G	K	V	N	P	T	Q	V	E	A	L	T	M	V
Template Known Secondary structure		T	S						S																																					T			S	S	S	.	.	S													T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		C	G	R	V	Q	G	A	L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	.	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	Q	G	Y
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		C	T	Q	V	M	G	N	H	V	T	V	T	I	A	G	S	N	G	H	L	E	L	N	V	F	K	P	V	I	I	Y	N	I	L	Q	S	I	E	L	L	S	D	S	V	N	S	F	V	T	H	C	V	K	G	L	E	P	N	I	A	R	I	N	T	L	R	D	K	S	L
Template Known Secondary structure																	T	T		B	T	T	B																													T	G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions