Return to main results Retrieve Phyre Job Id

Job DescriptionP11447
Confidence10.54%DateThu Jan 5 11:32:38 GMT 2012
Rank72Aligned Residues23
% Identity13%Templatec3cuqA_
PDB info PDB header:protein transportChain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150
Predicted Secondary structure 



Query SS confidence 






















Query Sequence  LLTANRQLQSALVETAQNNQDAV
Query Conservation 
   
  
   
   
     
 
Alig confidence 






















Template Conservation 
  

  
   
  

  
   
Template Sequence  MSKQLDMFKTNLEEFASKHKQEI
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 






















   36...40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions