Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 11 Aligned Residues 417 % Identity 22% Template c3c8tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	G	G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	L	E	S	D	A	E
Query Conservation
Alig confidence									.	.											.	.	.	.	.																																																			.
Template Conservation									.	.											.	.	.	.	.																																																			.
Template Sequence		L	Y	G	R	S	F	A	.	.	D	D	K	M	R	E	L	F	S	A	.	.	.	.	.	Q	S	F	I	S	R	C	V	E	T	E	V	A	L	A	R	A	Q	A	R	L	G	I	I	P	E	D	A	A	A	G	I	T	A	A	A	R	T	F	A	P	E	M	E	R	L	R	D	D	T	.	E	I	V	G	Y
Template Known Secondary structure			S	S				S	.	.								T	S		.	.	.	.	.																					T	T	S	S																											.				S	S
Template Predicted Secondary structure									.	.											.	.	.	.	.																																																			.
Template SS confidence
		20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	Q	L	G	K	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	C	K	D	T	V	S	E	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A	Q	N	N	Q	D	A	V	M	P	G	Y	T	H	L	Q	R	A	Q	P
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		P	I	L	.	P	L	V	E	Q	L	S	A	H	A	G	E	A	G	K	Y	L	H	W	G	A	T	T	Q	D	I	M	D	T	A	T	V	L	Q	I	R	D	G	L	A	L	I	S	R	R	I	E	S	V	R	K	A	L	A	A	L	A	R	N	H	R	D	T	P	M	A	G	R	T	H	L	Q	H	A	L	P
Template Known Secondary structure		S			.											G	G	G	G	G	G	S	S	S	S																																								T	T	T								T	T
Template Predicted Secondary structure					.
Template SS confidence
		92	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	R	E	Q	L	A	G	W	L	G	F	A	.	S	A	T	R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		V	T	F	G	Y	K	A	A	V	W	L	S	A	F	D	R	H	A	A	R	L	E	E	I	S	P	R	V	L	V	V	E	F	S	G	A	S	G	T	L	A	S	L	G	T	R	G	L	D	V	Q	R	E	L	A	R	E	L	N	L	G	V	P	S	I	T	W	H	S	A	R	D	A	V	A	E	T	V	Q	F
Template Known Secondary structure																															B						T	T	S	S		G	G	G	T	T														T		B			S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K	C	G	R	V	Q	G	A	L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	L	V	S	G	S	L	G	K	L	A	M	D	I	S	I	M	M	T	T	E	L	G	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	P	N	P	V	S	C	E	L	I	L	A	G	A	R	I	V	R	N	H	A	T	S	M	L	D	A	M	I	H	D	F	E	R	A	T	G	P	W
Template Known Secondary structure																				T	S	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.																													T				T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.															.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	.	.	Q	G	Y	A	N	A	T	E	L	A	D	Y	L	V	A	K	G	V	P	F	R	E	A	H	H	I	V	G	E	A	V	V	E	A	I	R	Q	G
Query Conservation																																										.	.
Alig confidence																																										.	.															.
Template Conservation																																																										.
Template Sequence		H	L	E	W	S	A	V	P	E	G	F	A	V	A	S	G	I	L	Y	Q	A	E	F	M	L	G	G	L	Q	V	F	P	D	R	M	R	E	N	L	D	H	S	R	G	L	I	V	A	E	A	V	M	M	A	L	A	.	P	H	T	G	R	K	E	A	H	D	I	V	Y	L	G	C	R	R	A	V	E	D	K
Template Known Secondary structure																												S													T	T	T	T	T	G	G	G										.																						T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	E	D	L	P	L	S	E	L	Q	K	F	S	Q	V	I	D	E	D	V	Y	P	I	L	S	L	Q	S	C	L	D	K	R	A	A	K	G	G	V	S	P	Q	Q	V	A	Q	A	I	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		T	G	L	F	E	V	L	R	T	M	P	E	V	A	K	P	L	G	E	E	A	L	R	D	L	T	D	P	R	N	Y	L	.	.	.	.	.	.	.	G	S	A	G	A	M	V	D	N	V	L	G
Template Known Secondary structure		S							T	T																	T		G	G	G			.	.	.	.	.	.	.	T	T										S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.								.	.	.	.	.	.	.	450	.	.	.	.