Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 23 Aligned Residues 415 % Identity 16% Template c3bhgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	L	T	A	.	.	.	.	.	.	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	L	E	S
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		G	R	Y	V	N	K	T	R	A	L	S	P	Y	F	S	E	.	.	.	.	.	F	A	L	T	Y	Y	R	L	X	V	E	I	K	W	F	E	S	L	A	A	N	D	T	I	P	E	V	P	A	L	D	N	K	A	R	K	F	L	S	D	L	I	S	N	F	N	E	S	E	A	E	K	I	K	E	F	E	K	Q
Template Known Secondary structure		T	T	T					G	G	G	T	T	T	S	S		.	.	.	.	.																				T		T	T		T	T	S																	T													T	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																				.	.	.	.	.	.																															.
Query SS confidence																				.	.	.	.	.	.																															.
Query Sequence		D	A	E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	.	.	.	.	.	.	Q	L	G	K	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	C	K	D	T	V	S	E	.	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A	Q	N	N	Q	D	A	V	M	P
Query Conservation																				.	.	.	.	.	.																															.
Alig confidence							.													.	.	.	.	.	.																															.
Template Conservation							.
Template Sequence		T	N	H	D	V	.	K	A	V	E	Y	Y	L	Q	D	K	F	Q	E	N	E	Q	L	K	S	C	V	A	F	I	H	F	A	C	T	S	E	D	I	N	N	L	A	Y	A	L	X	I	K	Q	A	I	A	Q	V	I	Q	P	T	I	A	E	I	X	G	S	I	T	L	L	G	K	Q	H	A	D	V	A	X	L
Template Known Secondary structure			S	S			.												T	T	S	T	T	G	G	G	G	G	G	G	T	T	T	T																						T																			T	T	T
Template Predicted Secondary structure							.
Template SS confidence
		89	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																											.																.	.	.	.	.
Query SS confidence																																											.																.	.	.	.	.
Query Sequence		G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	.	P	L	G	C	G	A	L	A	G	T	A	Y	E	I	D	.	.	.	.	.	R	E	Q	L	A	G	W	L	G	F	A	S	A	T	R	N	S	L
Query Conservation																																											.																.	.	.	.	.
Alig confidence																																											.																.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		S	R	T	H	G	Q	P	A	T	P	T	T	X	G	K	E	L	V	N	F	V	A	R	L	K	R	P	Q	Q	Q	L	A	E	V	L	I	P	A	K	F	N	G	A	V	G	N	Y	N	A	H	V	A	A	Y	P	E	V	D	W	R	K	H	C	A	N	F	V	T	S	L	G	L	S	F	N	A	Y	T	T	.
Template Known Secondary structure					T	T																																						S	S	S	S									T	T	S													T	T					S	S		S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K	C	G	R	V	Q	G	A	L	T	G	M
Query Conservation
Alig confidence		.																																								.	.	.	.	.	.	.
Template Conservation		.																																								.	.	.	.	.	.	.
Template Sequence		.	Q	I	E	P	H	D	G	I	A	E	V	S	Q	I	X	V	R	I	N	N	I	L	L	D	Y	T	Q	D	I	W	S	Y	I	S	L	G	Y	F	K	.	.	.	.	.	.	.	Q	K	T	S	S	T	X	P	H	K	V	N	P	I	D	F	E	N	A	E	G	N	L	G	L	S	N	A	L	F	I	H	F
Template Known Secondary structure		.	S	S																																	T	T	S			.	.	.	.	.	.	.						S	S						T
Template Predicted Secondary structure		.																																								.	.	.	.	.	.	.
Template SS confidence
			247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	Q	G	Y	A	N	A	T	E	L	A	D	Y	L	V	A	K	G	V	P	F	R	E	A	H	H
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		A	N	K	L	T	Q	S	R	X	Q	R	D	L	S	D	S	T	V	L	R	N	L	G	V	A	F	S	Y	S	L	I	A	Y	H	S	V	A	K	G	N	D	K	L	Q	I	N	K	S	A	L	Q	K	D	L	S	E	N	W	E	V	L	A	E	A	I	Q	T	V	X	R	R	.	Y	N	E	P	N	A	Y	E
Template Known Secondary structure					T	T			S	T	T			T							T	T																				T	T														T		G	G	G	G											.	T	T		T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		I	V	G	E	A	V	V	E	A	I	R	Q	G	K	P	L	E	D	L	P	L	S	E	L	Q	K	F	S	Q	V	I	D	E	D	V	Y	P	I	.	.	L	S	L	Q	S	C	L	D	K	R	A	A	K	G	G	V	S	P	Q	Q	V	A	Q	A
Query Conservation																																								.	.
Alig confidence																								.	.	.	.	.												.	.								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		Q	L	K	E	L	T	R	G	Q	X	I	D	A	E	N	L	K	K	F	I	K	T	.	.	.	.	.	L	S	I	P	E	E	A	K	A	E	L	X	K	L	T	P	E	T	Y	T	.	.	.	.	.	.	.	G	L	A	T	Q	L	V	K	A	F
Template Known Secondary structure								T	T	S													T	.	.	.	.	.	S		S													G	G	G			.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																								.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.								.	.	.	.	450	.	.	.	.	.