Job Description P11447 Confidence 100.00% Date Thu Jan 5 11:32:38 GMT 2012 Rank 20 Aligned Residues 419 % Identity 16% Template c2qgaC_ PDB info PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound Resolution 2.01 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		G	R	F	T	Q	A	A	D	Q	R	F	K	Q	F	N	D	S	L	R	F	D	Y	R	L	A	E	Q	D	I	V	G	S	V	A	W	S	K	A	L	V	T	V	G	V	.	.	.	.	L	T	A	E	E	Q	A	Q	L	E	E	A	L	N	V	L	L	E	D	V	R	A	R	P	Q	Q	I	L	E	S	D	A
Query Conservation																																														.	.	.	.
Alig confidence																		.	.	.	.	.																								.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		G	R	Y	K	K	A	C	G	E	L	S	A	F	F	S	E	.	.	.	.	.	H	A	L	I	K	H	R	I	I	V	E	V	R	W	L	L	F	L	N	E	E	E	L	F	F	E	K	V	T	D	H	S	V	E	V	L	N	Q	I	A	T	N	I	T	D	S	D	I	A	R	V	K	A	I	E	E	E	T	N
Template Known Secondary structure		T	T	T					G	G	G	G	G	T	S	S		.	.	.	.	.																						T	S	S	S																																		S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																														.
Query SS confidence																			.	.	.	.	.	.	.	.																														.
Query Sequence		E	D	I	H	S	W	V	E	G	K	L	I	D	K	V	G	Q	.	.	.	.	.	.	.	.	L	G	K	K	L	H	T	G	R	S	R	N	D	Q	V	A	T	D	L	K	L	W	C	K	D	T	V	S	E	.	L	L	T	A	N	R	Q	L	Q	S	A	L	V	E	T	A	Q	N	N	Q	D	A	V	M	P
Query Conservation																			.	.	.	.	.	.	.	.																														.
Alig confidence					.														.	.	.	.	.	.	.	.																														.
Template Conservation					.
Template Sequence		H	D	V	.	K	A	V	E	Y	F	V	K	E	K	L	K	N	S	K	R	E	D	L	L	K	I	K	E	Y	V	H	Y	L	C	T	S	E	D	I	N	N	V	A	Y	A	T	C	L	K	A	C	L	N	D	V	V	I	P	C	L	E	K	I	M	L	K	L	K	D	L	A	V	E	Y	S	H	V	P	L	L
Template Known Secondary structure					.													T	S	S								G	G	G	T	T	T	T																						T																			T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		86	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.											.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	T	H	L	Q	R	A	Q	P	V	T	F	A	H	W	C	L	A	Y	V	E	M	L	A	R	D	E	S	R	L	Q	D	A	L	K	R	L	D	V	S	P	L	G	C	G	A	L	A	G	T	A	Y	E	.	.	.	.	.	.	.	.	.	.	I	D	R	E	Q	L	A	G	W	L	G	F	A	S	A	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.
Template Sequence		S	R	T	H	G	Q	P	A	S	S	T	T	F	G	K	E	M	A	N	F	Y	A	R	I	H	H	H	V	G	V	I	R	R	V	K	V	C	A	.	.	.	K	F	N	G	A	V	G	N	F	N	A	H	K	V	A	S	K	D	T	D	W	V	N	T	I	G	L	F	L	K	K	H	F	N	L	T	Y	S	I
Template Known Secondary structure					T	T																													S					.	.	.					T	T	S	S									T	T	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	S	L	D	S	V	S	D	R	D	H	V	L	E	L	L	S	A	A	A	I	G	M	V	H	L	S	R	F	A	E	D	L	I	F	F	N	T	G	E	A	G	F	V	E	L	S	D	R	V	T	S	G	S	S	L	M	P	Q	K	K	N	P	D	A	L	E	L	I	R	G	K	C	G	R	V	Q	G	A
Query Conservation
Alig confidence					.	.																																							.	.	.	.	.	.
Template Conservation					.	.																																							.	.	.	.	.	.
Template Sequence		Y	C	T	.	.	Q	I	Q	D	H	D	Y	I	C	E	L	C	D	G	L	A	R	A	N	G	T	L	I	D	L	C	V	D	I	W	L	Y	I	S	N	N	L	L	.	.	.	.	.	.	K	L	K	V	G	S	S	T	M	P	H	K	V	N	P	I	D	F	E	N	A	E	G	N	L	H	I	A	N	A	F
Template Known Secondary structure				S	.	.	S	S																																	T	T	S		.	.	.	.	.	.							S	S		T	T
Template Predicted Secondary structure					.	.																																							.	.	.	.	.	.
Template SS confidence
		242	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	T	G	M	M	M	T	L	K	G	L	P	L	A	Y	N	K	D	M	Q	E	D	K	E	G	L	F	D	A	L	D	T	W	L	D	C	L	H	M	A	A	L	V	L	D	G	I	Q	V	K	R	P	R	C	Q	E	A	A	Q	.	Q	G	Y	A	N	A	T	E	L	A	D	Y	L	V	A	K	G	V	P	F
Query Conservation																																																													.
Alig confidence																																																													.																.	.
Template Conservation																																																																													.	.
Template Sequence		F	K	L	F	S	S	K	L	P	T	S	R	L	Q	R	D	L	S	D	S	T	V	L	R	N	I	G	S	S	L	A	Y	C	L	I	A	Y	K	S	V	L	K	G	L	N	K	I	D	I	D	R	R	N	L	E	E	E	L	N	Q	N	W	S	T	L	A	E	P	I	Q	I	V	M	K	R	.	.	H	N	Y
Template Known Secondary structure									T	T			S	T	T			T							T	T																				T	T														T		G	G	G	G											.	.	T	T
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	H	H	I	V	G	E	A	V	V	E	A	I	R	Q	G	K	P	L	E	D	L	P	L	S	E	L	Q	K	F	S	Q	V	I	D	E	D	V	Y	P	I	L	S	L	Q	S	C	L	D	K	R	A	A	K	G	G	V	S	P	Q	Q	V	A	Q	A	I	A	F
Query Conservation
Alig confidence																																												.								.	.	.	.	.	.	.
Template Conservation																																												.								.	.	.	.	.	.	.
Template Sequence		V	D	A	Y	E	E	L	K	Q	F	T	R	G	K	V	I	D	Q	K	I	M	Q	E	F	I	K	T	K	C	A	F	L	P	Q	D	V	V	D	Q	L	L	E	.	L	T	P	A	T	Y	T	.	.	.	.	.	.	.	G	Y	A	D	Y	L	A	K	N	V	E	R	L
Template Known Secondary structure		S											T	T	S															S	T	T	S											.			T	T	T			.	.	.	.	.	.	.	T	T							T
Template Predicted Secondary structure																																												.								.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.								.	.	.	.	450	.	.	.	.	.	.	.	.