Job Description P11447 Confidence 9.42% Date Thu Jan 5 11:32:38 GMT 2012 Rank 81 Aligned Residues 39 % Identity 23% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	L	Q	K	F	S	Q	V	I	D	E	D	V	Y	P	I	L	S	L	Q	S	C	L	D	K	R	A	A	K	G	G	V	S	P	Q	Q	V	A	Q	A	I	A	F	A	Q	A	R	L	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	N	E	D	K	R	K	P	Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	R	T	V	A	K	Y	R	E	M	L	G
Template Known Secondary structure			T	T	S		T	T	S															T			.	.	.	.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.													.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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