Return to main results Retrieve Phyre Job Id

Job DescriptionP11447
Confidence50.72%DateThu Jan 5 11:32:38 GMT 2012
Rank33Aligned Residues87
% Identity29%Templatec1x5bA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:signal transducing adaptor molecule 2; PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.. .......290.........300.........310.........320.........330.........340.........350.
Predicted Secondary structure 









.










Query SS confidence 









.




































































Query Sequence  VTSGSSLMPQ. KKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQV
Query Conservation     


 

 .



   
 
   
    
                  
       
          
     

  
 
Alig confidence 









.



..







...................

































..
Template Conservation         
      
..   




...................

      

  

 


 
       
 
 
 
..
Template Sequence  GSSGSSGMPLFTANP. . FEQDVEKA. . . . . . . . . . . . . . . . . . . TNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAI. .
Template Known Secondary structure 













T..T...................T
TT
SS

SSS..
Template Predicted Secondary structure 











.....................













..
Template SS confidence 















































































   1........10..... ....20... ......30.........40.........50.......
 
   352.......360.........370....... ..380...
Predicted Secondary structure 





.


Query SS confidence 

























.





Query Sequence  KRPRCQEAAQQGYANATELADYLVAK. GVPFRE
Query Conservation 
 


   
      

 

  

  .
   
 
Alig confidence  .
























.





Template Conservation  . 


   
   

 

 


 





  
  
Template Sequence  . MKRVNHKVPHVALQALTLLGACVANCGKIFHL
Template Known Secondary structure  .T
SST
Template Predicted Secondary structure  .





Template SS confidence 
































   58.60.........70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions