 |
Job Description | P23930 | Confidence | 19.36% | Date | Thu Jan 5 11:40:39 GMT 2012 |
Rank | 39 | Aligned Residues | 52 |
% Identity | 12% | Template | c3o3cD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2; |
PDBTitle: glycogen synthase basal state udp complex
|
Resolution | 3.51 Å |
|
  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | C | Y | E | I | I | L | G | E | Q | V | R | D | N | F | R | P | D | T | D | Y | L | L | T | I | S | N | D | A | W | F | G | K | S | I | G | P | W | Q | H | F | Q | M | A | R | M | R | A | L | E | L | A | R | P | L | L | R | S | T | N | N | G |
Query Conservation |   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
| . | . | . |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |   |
|
|
|   |
|
|
|   |   |
|
|
Template Sequence |   |
L | N | A | N | N | P | I | L | G | L | D | Y | D | E | F | V | R | G | C | H | L | G | V | F | P | S | . |
. |
. |
Y | Y | E | P | . |
W | G | Y | T | P | A | E | C | T | V | . |
. |
. |
. |
. |
. |
M | G | V | P | S | I | T | T | N | V | S | G |
Template Known Secondary structure |   |
|
| T | T |
| S | S |
|
|
|
|  |  |  |  |  |  |  | S | S |  |  |  |
|
|
| . | . | . | S | S | B | S | . | S |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | T | T |
|
|  |  |  |  | S | S | B |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | |
|
|
. | . | . | 510 | |
. | . | . | . | . | . | . | . | . | 520 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 530 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|