Job Description P23930 Confidence 100.00% Date Thu Jan 5 11:40:39 GMT 2012 Rank 8 Aligned Residues 232 % Identity 22% Template c3hkxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. Resolution 1.66 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.											.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																							.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	K	T	I	Q	V	S	M	V	Q	G	D	I	P	Q	S	L	K	W	D	E	G	Q	L	L	N	T	L	K	I	Y	Y	N	A	T	A	.	P	L	M	G	K	S	S	L	I	I	W	P	E	S	A	I	T	D	L	E	I	N	Q	.	.	.	.	.	.	.	.	.	.	Q	P	F	L	K	A	L	D	G
Query Conservation																																							.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.													.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		R	G	S	H	M	R	I	A	L	M	Q	H	T	A	R	P	L	D	P	.	.	.	.	.	.	Q	H	N	L	D	L	I	D	D	A	A	A	R	A	S	E	Q	G	A	Q	L	L	L	T	P	E	L	F	G	F	G	Y	V	P	S	Q	I	C	A	Q	V	S	A	E	Q	V	D	A	A	R	S	R	L	R	G
Template Known Secondary structure		T	T										B				T	T			.	.	.	.	.	.																	T	T		S						T	T	G	G	G		S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	D	K	G	S	S	L	V	T	G	I	V	D	A	R	L	N	K	Q	N	R	Y	D	T	Y	N	T	I	I	T	L	G	K	G	A	P	Y	S	Y	E	S	A	D	R	Y	N	K	N	H	L	V	P	F	G	E	F	V	P	L	E	S	I	L	R	P	L	A	P	F	F	D	L	P	M	S	S	F	S
Query Conservation
Alig confidence																							.	.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	R	D	R	G	I	A	L	V	W	S	L	P	G	P	E	G	P	E	Q	.	.	.	.	R	G	I	T	A	E	L	A	D	E	H	G	.	.	.	.	E	V	L	A	S	Y	Q	K	V	Q	L	Y	G	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	F	V
Template Known Secondary structure						T	T	S							B		S	S		T	T	T	.	.	.	.			B							T	T	S	.	.	.	.									S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																							.	.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																			140	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	P	Y	I	Q	P	P	L	S	A	N	G	I	E	L	T	A	A	I	C	Y	E	I	I	L	G	E	Q	V	R	D	N	F	R	P	D	T	D	Y	L	L	T	I	S	N	D	A	W	F	G	K	S	I	G	P	W	Q	H	F	Q	M	A	R	M	R	A	L	E	L	A	R	P	L	L	R	S	T	N	N
Query Conservation
Alig confidence																																															.	.														.	.
Template Conservation																																															.	.														.	.
Template Sequence		P	G	E	Q	P	P	P	V	L	S	W	G	G	R	Q	L	S	L	L	V	C	Y	D	V	E	F	P	E	M	V	R	A	A	A	A	R	G	A	Q	L	V	L	V	P	T	.	.	A	L	A	G	D	E	T	S	V	P	G	I	L	.	.	L	P	A	R	A	V	E	N	G	I	T	L	A	Y	A	N	H	C
Template Known Secondary structure					S								T	T								G	G	G	G	G	S										T	T		S							.	.			B	S			T					T		.	.									T								B
Template Predicted Secondary structure																																															.	.														.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
											447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.					.	480	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	I	T	A	V	I	G	P	Q	G	E	I	Q	A	M	I	P	Q	F	T	R	E	V	L	T	T	N	V	T	P	T	T	.	.	.	.	G	L	T	P	Y	A	R	T
Query Conservation		.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.															.	.	.	.
Template Conservation																												.
Template Sequence		G	P	E	G	G	L	V	F	D	G	G	S	V	V	V	G	P	A	G	Q	P	L	G	E	L	G	.	V	E	P	G	L	L	V	V	D	L	P	D	D	Y	L	Q	D	R	R	A	E	L	H	R	N	W
Template Known Secondary structure					T	T												T	T	S								.	S	S																S
Template Predicted Secondary structure																												.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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