Job Description P23930 Confidence 100.00% Date Thu Jan 5 11:40:39 GMT 2012 Rank 6 Aligned Residues 227 % Identity 15% Template c2w1vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution Resolution 1.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																							.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																							.	.	.	.	.	.	.	.	.
Query Sequence		K	T	I	Q	V	S	M	V	Q	G	D	I	P	Q	S	L	K	W	D	E	G	Q	L	L	N	T	L	K	I	Y	Y	N	A	T	A	.	P	L	M	G	K	S	S	L	I	I	W	P	E	S	A	I	T	D	L	E	I	N	.	.	.	.	.	.	.	.	.	Q	Q	P	F	L	K	A	L	D	G	E	L	R
Query Conservation																																					.																							.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.															.																							.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		S	T	F	R	L	A	L	I	Q	L	Q	V	S	S	.	.	.	.	.	.	.	I	K	S	D	N	L	T	R	A	C	S	L	V	R	E	A	A	K	Q	G	A	N	I	V	S	L	P	E	C	F	N	S	P	Y	G	T	T	Y	F	P	D	Y	A	E	K	I	P	G	E	S	T	Q	K	L	S	E	V	A	K
Template Known Secondary structure															S	.	.	.	.	.	.	.																			T	T		S						T	T	T	T	S			S	T	T	T						B		S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	S	S	L	V	T	G	I	V	D	A	R	L	N	K	Q	N	R	Y	D	T	Y	N	T	I	I	T	L	G	K	G	A	P	Y	S	Y	E	S	A	D	R	Y	N	K	N	H	L	V	P	F	G	E	F	V	P	L	E	S	I	L	R	P	L	A	P	F	F	D	L	P	M	S	S	F	S	R	G	P
Query Conservation
Alig confidence																			.	.	.	.														.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.														.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	S	I	Y	L	I	G	G	S	I	P	E	E	D	A	G	.	.	.	.	K	L	Y	N	T	C	S	V	F	G	P	D	G	.	.	.	.	S	L	L	V	K	H	R	K	I	H	L	F	D	I	D	V	P	G	K	I	.	.	.	.	.	.	.	.	.	.	T	F	Q	E	S	K	T	L	S	P	G	D
Template Known Secondary structure				T	S												T	T	.	.	.	.											T	T	S	.	.	.	.									S	S							T	T	T		.	.	.	.	.	.	.	.	.	.				G	G	G	T
Template Predicted Secondary structure																			.	.	.	.														.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		Y	I	Q	P	P	L	S	A	N	G	I	E	L	T	A	A	I	C	Y	E	I	I	L	G	E	Q	V	R	D	N	F	R	P	D	T	D	Y	L	L	T	I	S	N	D	A	W	F	G	K	S	I	G	P	W	Q	H	F	Q	M	A	R	M	R	A	L	E	L	A	R	P	L	L	R	S	T	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence				.																																							.	.	.																																.	.	.	.	.
Template Conservation				.																																							.	.	.
Template Sequence		S	F	.	S	T	F	D	T	P	Y	C	K	V	G	L	G	I	C	Y	D	M	R	F	A	E	L	A	Q	I	Y	A	Q	R	G	C	Q	L	L	V	Y	P	.	.	.	G	A	F	N	L	T	T	G	P	A	H	W	E	L	L	Q	R	A	R	A	V	D	N	Q	V	Y	V	A	T	A	S	P	A	R	D	D
Template Known Secondary structure				.						S	S								G	G	G	G	G											T	T								.	.	.					T	T																		T												T
Template Predicted Secondary structure				.																																							.	.	.
Template SS confidence
		175	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
							445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	N	G	I	T	A	V	I	G	P	Q	G	E	I	Q	A	M	I	P	Q	F	T	R	E	V	L	T	T	N	V	T	P
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																				.
Template Conservation																										.
Template Sequence		K	A	S	Y	V	A	W	G	H	S	T	V	V	D	P	W	G	Q	V	L	T	K	A	G	.	T	E	E	T	I	L	Y	S	D	I	D	L
Template Known Secondary structure		T	S	S	S											T	T	S								.	S	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions