Job Description P23930 Confidence 100.00% Date Thu Jan 5 11:40:39 GMT 2012 Rank 4 Aligned Residues 233 % Identity 17% Template c1emsB_ PDB info PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein Resolution 2.80 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.											.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																							.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	K	T	I	Q	V	S	M	V	Q	G	D	I	P	Q	S	L	K	W	D	E	G	Q	L	L	N	T	L	K	I	Y	Y	N	A	T	A	.	P	L	M	G	K	S	S	L	I	I	W	P	E	S	A	I	T	D	L	E	I	N	.	.	.	.	.	.	.	.	.	.	Q	Q	P	F	L	K	A	L	D	G
Query Conservation																																							.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.															.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		A	T	G	R	H	F	I	A	V	C	Q	M	T	S	D	N	.	.	.	.	.	.	.	D	L	E	K	N	F	Q	A	A	K	N	M	I	E	R	A	G	E	K	K	C	E	M	V	F	L	P	E	C	F	D	F	I	G	L	N	K	N	E	Q	I	D	L	A	M	A	T	D	C	E	Y	M	E	K	Y	R	E
Template Known Secondary structure				S									B				S	.	.	.	.	.	.	.																			T	T		S							T		S				S	S	T	T	T	T	T	T	S		B		S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	D	K	G	S	S	L	V	T	G	I	V	D	A	R	L	N	K	Q	N	R	Y	D	T	Y	N	T	I	I	T	L	G	K	G	A	P	Y	S	Y	E	S	A	D	R	Y	N	K	N	H	L	V	P	F	G	E	F	V	P	L	E	S	I	L	R	P	L	A	P	F	F	D	L	P	M	S	S	F	S
Query Conservation
Alig confidence																							.																.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	R	K	H	N	I	W	L	S	L	G	G	L	H	H	K	D	P	S	D	.	A	A	H	P	W	N	T	H	L	I	I	D	S	D	G	.	.	.	.	V	T	R	A	E	Y	N	K	L	H	L	F	D	L	E	I	P	G	K	V	.	.	.	.	.	.	.	.	.	.	R	L	M	E	S	E	F	S	K
Template Known Secondary structure						T	T													S	S		.	T	T	S										S	S	S	.	.	.	.																	T	T	T		.	.	.	.	.	.	.	.	.	.									B
Template Predicted Secondary structure																							.																.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.											140	.	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	P	Y	I	Q	P	P	L	S	A	N	G	I	E	L	T	A	A	I	C	Y	E	I	I	L	G	E	Q	V	R	D	N	F	R	P	D	T	D	Y	L	L	T	I	S	N	D	A	W	F	G	K	S	I	G	P	W	Q	H	F	Q	M	A	R	M	R	A	L	E	L	A	R	P	L	L	R	S	T	N	N
Query Conservation
Alig confidence																																														.	.	.
Template Conservation																																														.	.	.
Template Sequence		A	G	T	E	M	I	P	P	V	D	T	P	I	G	R	L	G	L	S	I	C	Y	D	V	R	F	P	E	L	S	L	W	N	R	K	R	G	A	Q	L	L	S	F	P	.	.	.	S	A	F	T	L	N	T	G	L	A	H	W	E	T	L	L	R	A	R	A	I	E	N	Q	C	Y	V	V	A	A	A	Q	T
Template Known Secondary structure					S								T	T								G	G	G	G	G											T	T		S						.	.	.	B			B																				T							B	B
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
												447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	I	T	A	V	I	G	P	Q	G	E	I	Q	A	M	I	P	Q	F	T	R	E	V	L	T	T	N	V	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																													.
Template Sequence		G	A	H	N	P	K	R	Q	S	Y	G	H	S	M	V	V	D	P	W	G	A	V	V	A	Q	C	S	.	E	R	V	D	M	C	F	A	E	I	D	L
Template Known Secondary structure						T	T												T	T	S								.	S	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions