Job Description P00954 Confidence 98.27% Date Thu Jan 5 10:57:18 GMT 2012 Rank 48 Aligned Residues 191 % Identity 17% Template d1pfva2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 1.70

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		2	.	.	.		.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.
Predicted Secondary structure						.						.																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.						.																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	P	I	.	V	F	S	G	A	.	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	.	.	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	L	R	K	A	T	L
Query Conservation						.						.																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.						.																								.	.	.	.									.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		A	K	K	I	L	V	T	C	A	L	P	Y	A	N	G	S	I	H	L	G	H	M	L	E	H	I	Q	A	D	V	W	V	R	Y	Q	R	M	R	G	H	E	V	N	F	I	C	.	.	.	.	.	A	D	D	A	H	G	T	P	I	M	L	K	A	Q	Q	L	G	I	T	P	E	Q	M	I	G	E	M	S	Q
Template Known Secondary structure													B	T	T	S			B																				T	T								.	.	.	.	.			B			S											T	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																																																													.	80	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	H	Q	T	D	F	A	G	F	N	I	S	Y	D	N	Y	H	S	T	H	S	E	E	N	R	Q	L	S	E	L	I	Y	S	R	L	K	E	N	G	F	I	K	N	R	T	I	S	Q	L	Y	D	P	E	K	G	M	F	L	P	D	R	F	V	V	S	G	A	T	P	V	M	R	D	S	E	H	F	F	F	D
Template Known Secondary structure										T	T				S					S	S	S																	T	T													T	T	T	T					T	T				S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	S	F	S	E	M	L	Q	A	W	T	R	S	G	A	L	Q	E	Q	V	A	N	K	M	Q	E	W	F	E	S	G	L	Q	Q	W	D	I	S	R	D	A	P	Y	F	G	F	E	I	P	N	A	P	G	K	Y	F	Y	V	W	L	D	A	P	I	G	Y	M	G	S	F	K	N	L	C	D	K	R	G	D
Template Known Secondary structure		G	G	G	G									T	T	S		S																									S	S		S	S		B		T	T		T	T																									T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		142																.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	P	V	G	E	D	Q	.	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																													.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		S	V	S	F	D	E	Y	W	K	K	D	S	T	A	E	L	Y	H	F	I	G	K	D	I	V	Y	F	H	S	L	F	W	P	A	M	L	E	G	S	N	F	R	K	P	S	N	L	F	V	H	G	Y	V	.	.	.	.	.	.	.	.	.	.	.	T	V	N	G	A	K	M	S	K	S	.	.	.	R	G	T
Template Known Secondary structure		S	S							B	T	T			S								G	G	G						T									T	T	B				S									.	.	.	.	.	.	.	.	.	.	.			T	T	B	S			T	T	.	.	.	T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.												.	.	.	330	.	.	.	.	.	.				.	.	.
		206	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	K	A	S	T
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions