Job Description P00954 Confidence 98.39% Date Thu Jan 5 10:57:18 GMT 2012 Rank 43 Aligned Residues 197 % Identity 16% Template d1li5a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.30

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		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.															.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure						.																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	I	V	.	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	.	.	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	K	L	R	K	A	T	L	D	T
Query Conservation						.																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																												.	.	.	.									.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		E	V	G	M	Y	V	C	G	I	T	V	Y	D	L	C	H	I	G	H	G	R	T	F	V	A	F	D	V	V	A	R	Y	L	R	F	L	G	Y	K	L	K	Y	V	R	.	.	.	.	.	N	I	T	D	I	D	D	K	I	I	K	R	A	N	E	N	G	E	S	F	V	A	M	V	D	R	M	I	A	E	M
Template Known Secondary structure											B	S	S	S			B																					T								.	.	.	.	.		B	B			S										T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V	Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	.	.	.	.	.	.	.	.	.	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	D	F	D	A	L	N	I	L	R	P	D	M	E	P	R	A	T	H	H	I	A	E	I	I	E	L	T	E	Q	L	I	A	K	G	H	A	Y	V	A	D	N	G	D	V	M	F	D	V	P	T	D	P	T	Y	G	V	L	S	R	Q	K	R	N	P	M	D	F	V	L	W	K	M	S	K	E	G	E	P
Template Known Secondary structure								T	T					S	B			B	G	G	G															T	T	S					T	T	S						G	G	G		T	T	T	T	T	T	T	T				S	T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
									123	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.													.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	A	G	L	F	D	Y	P	V	L	M	A	A	.	.	.	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	.	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E
Query Conservation		.	.	.	.	.	.	.													.	.	.																	.
Alig confidence		.	.	.	.	.	.	.													.	.	.																	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		S	W	P	S	P	W	G	A	G	R	P	G	W	H	I	E	C	S	A	M	N	C	K	Q	L	G	N	H	F	D	I	H	G	G	G	S	D	L	M	F	P	H	H	E	N	E	I	A	Q	S	T	C	A	H	D	G	Q	Y	V	N	Y	W	M	H	S	G	M	V	M	V	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B			T	T		S					S	S													S	S							B	G	G	G	T	T	T													S	S	S									B						T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	.	.	.	.	.	D	P	K	S	V	V
Query Conservation																						.	.	.	.	.
Alig confidence		.								.	.	.										.	.	.	.	.
Template Conservation		.								.	.	.
Template Sequence		.	R	E	K	M	S	K	S	.	.	.	L	G	N	F	F	T	V	R	D	V	L	K	Y	Y	D	A	E	T	V	R
Template Known Secondary structure		.	T	B				G	G	.	.	.	G	T				B						T	T	S
Template Predicted Secondary structure		.								.	.	.
Template SS confidence
			264	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions