Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 4 Aligned Residues 309 % Identity 54% Template c3prhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	T	I	F	S	G	I	Q	P	S	G	S	V	T	L	G	N	Y	I	G	A	M	K	Q	F	V	E	L	Q	H	D	Y	N	S	Y	F	C	I	V	D	Q	H	A	I	T	V	P	Q	D	R	L	E	L	R	K	N	I	R	N	L	A	A	L	Y	L	A	V	G	L	D	P	E	K	A	T	L	F	I	Q
Template Known Secondary structure													S			B							T							T	T	T	T	S												T	T	S																					T	T			T	T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	V	P	A	H	A	Q	A	G	W	M	M	Q	C	V	A	Y	I	G	E	L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	S	G	L	L	T	Y	P	P	L	M	A	A	D	I	L	L	Y	G	T	D	L	V	P	P	G	E	D	Q	K	Q	H	L	E	L	T	R	N	L	A	E
Template Known Secondary structure		G	G		T											T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.							T											T	T	T								T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.															.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G
Query Conservation
Alig confidence																		.	.	.	.																																																	.	.
Template Conservation																		.	.	.	.																																																	.	.
Template Sequence		R	F	N	K	K	Y	N	D	I	F	T	I	P	E	V	K	.	.	.	.	I	A	R	I	M	S	L	N	D	P	L	K	K	M	S	K	S	D	P	N	Q	K	A	Y	I	T	L	L	D	E	P	K	Q	L	E	K	K	I	K	S	A	V	T	D	S	E	G	I	.	.	V	K	F	D	K	E	N	K	P	G
Template Known Secondary structure							T											.	.	.	.					B		S	S		T	T	S	B			T	T		S	S	T	T	S			B	T	T												T	S				S	S			.	.					T	T	T	S
Template Predicted Secondary structure																		.	.	.	.																																																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	L	L	D	I	L	S	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F	L	Q	Q	V	M	K	D	G	A	E	K	A	S	A	H	A	S	R	T	L	K
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		V	S	N	L	L	T	I	Y	S	I	L	G	N	T	T	I	E	E	L	E	A	K	Y	E	G	K	G	Y	G	E	F	K	G	D	L	A	E	V	V	V	N	A	L	K	P	I	Q	D	R	Y	Y	E	L	I	E	S	E	.	E	L	D	R	I	L	D	E	G	A	E	R	A	N	R	T	A	N	K	M	L	K
Template Known Secondary structure														T	S									T	T	T																															S	S	.
Template Predicted Secondary structure																																																											.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Y	E	A	I	G	F	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	E	N	A	M	G	L	G	R
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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